| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_08390 |
|---|
| Symbol | |
|---|
| ID | 8375047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 959064 |
|---|
| End bp | 959717 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644993761 |
|---|
| Product | LysR family regulator |
|---|
| Protein accession | YP_003151223 |
|---|
| Protein GI | 256827264 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0347693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 105 |
|---|
| Fosmid unclonability p-value | 0.270686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA AGTTTGCCGT ATCTGGCCAA CATTATCTCT TTAGCGTGCA GGCATTCGCT
CATACTGTTC TTGCCGGTGG AGGTGTTGAA TATTCCTATG CCTTCCGCAA TGGCACTACG
CGCAGTGTTA TCGCCGATGT GCAAACAGGT CGCAGCAATT TGGGCGTGCT GTTTGAAACA
ACGGAAAACG CCGATGAAAT TGAAGCAGCA GTGCTATCGG CGGGGTTAGA ATTTACGCCG
ATCATTTCAT CGAAGCCGTA TATCGCTCTG CCCAAGAGCC ACCCATTGAG CAACGCACGA
AGCGTCTCTA TTGAAGACAT GACTGATTAT CCCTATGTCT ATTTTGAACA GGAGGAAGGC
GATTCGTTTG CCTTCTTTGA AGAGGCCTTA TCTTCTGTCC CTCGTGAAAA GCGTATTGCA
ACGACTGATC GAGCAAGTTT AACTGAGCTT ATTGCGGCAC TCAATGGGTA CACGGTAACA
AGCGGCATTC TGGTGGGCAT TACTGATGGA TCGCTGCTGC AGACTATTCC GCTGCAAACC
GACGTGACCT TAAAACTCGG ATACATTGCG CAAAAGGGTG CTCATCTCGA GGGTCCCGCT
GAGGGTTTTG TGCAGAGTCT GACAAAGAAC CTCTCTCGAT ACGTACGGCT GTAG
|
|---|
| Protein sequence | METKFAVSGQ HYLFSVQAFA HTVLAGGGVE YSYAFRNGTT RSVIADVQTG RSNLGVLFET
TENADEIEAA VLSAGLEFTP IISSKPYIAL PKSHPLSNAR SVSIEDMTDY PYVYFEQEEG
DSFAFFEEAL SSVPREKRIA TTDRASLTEL IAALNGYTVT SGILVGITDG SLLQTIPLQT
DVTLKLGYIA QKGAHLEGPA EGFVQSLTKN LSRYVRL
|
|---|
| |