Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_08300 |
Symbol | |
ID | 8375038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 947152 |
End bp | 948930 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644993752 |
Product | glycosyl hydrolase family 25 |
Protein accession | YP_003151214 |
Protein GI | 256827255 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 104 |
Fosmid unclonability p-value | 0.39526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAA GTTACACTAG TTCTTCGTAT GCCACACGGC ATACGAATGC ACCCATCCGT ATAGCAGGTG CTTTTCTTCT TGCTGGCATG CTTGCTCTGT CAACTATGCC GGATCTCGCA TGGGCTACTG CCACAAATTC GTCTAGTAGG GATACTTCTA CTTCCACCCA GGTAACCAGC ACCACCTCCT CATCTCCCAC ACAAGCACAG CGCAGCGATT CATTTACACA AACAACAAGT GCTCAACAGA CAGATGAGAT CGATGCAGCC CTGAGCGATT CCTCTACCGC CGCTGATGCA ACACAGACAT CATCTGCACA AGCAGCTGAC ACAGCAAAAG CAGCAGAAAA CAGCTGGCGG TATCGCGATG GGGTACGGCT GTACACAGAC GGTACTACCG AAAAATCACT GGACACCACC GAAACGCAAA GTAAATCCGC CAGTAGCCAA TCACGTCCAT CGAATCGACC AGCTGGCACC CAACTTTCAA AATGGAGCCT CACGAGTGAA GGGGCTGTCT CCCCCACGGG CGAAGTGATT GAAGGAGCAA CAGCTATTGG CATTGACGTC AGTCACCATC AAGGCACGAT TAACTGGGAA AAGGTAAAGG CTGCCGGTAT CGATTTTGTT ATCTTACGCT GCGGTCAAAG CACCAATATC AACGACCGCC AATGGAAACG CAACGTCGGT GAATGTGAAC GCCTTGGCAT TCCCTACGGT GTCTATTTAT ACTCCACGGC CACTACCGTT GATGAAGCGC GCGACGAGGC ACAGCGAACC CTGCGCGACC TTGCTGGCCA CAGCCCTTCG TACCCTGTGT ACTTCGACCT TGAAGAATCG GACCTCGCAT CAACCGATAA TCGCCAGTTA CTTGCCGACA TGGCTCAGGC ATACTGCGAC ATCATCGAAG ATGCAGGCTA TACACCTGGT GTATATGCGA ACGTCAACTG GTGGAATAAC TATCTGACCG ATTCGGTATT TGATCAGTGG GATCGCTGGA TTGCACACTA CCGCAACTAT CAGTCTTCCT ACAAAAAGGC ATATCACCTA TGGCAATGCT CTGATGTCGA GCGTGTCGAC GGCATTATCG GCAACGTTGA TCTCGACTTT GAATTTGGCG GCACGCCCTA TCCCTCAAAA TATACGTGGA TTGAAGATAG TCACGGTTGG TGGCTGAAAC GAGCCGACGG AAGCTATCCT GCCTCTGCCT GGGAAAAAGT AAATGGCACG TGGTACTATT TCGATTCAGA GGGCTATCTT GCTTCCGGTT GGCAAAAGCT GAATGGCTCG TGGTACTACT TGAACCCTGA TCATGACGGT ACGTTTGGCG CCATGCAGAC CGGCTGGCAA AAGATAGACG GTATCTGGTA TCACTTTGCA AGCTGGGGTG GCGCGAATGT CGGGTGGCAG CAGGTAGATG GCACGTGGTA TCACTTCGAT TTATCTGGTG GCATGGAAAC GGGCTGGTTG CAATTAGATG GCTCATGGCA TTACTTTGCC TGGTGGGGTG GCATGCGCAC CGACTGGCAA GAAATCGATA ATACCTGGTA CTACTTCGAT TCAGAAGGTA TTCTTCTGTC GGGTTGGCAG AAAATAGATG GTTCGTGGTA CTACTTAAAC CCCAACCATG ATGGCACATT CGGCGCCATG CAGACCGGCT GGCAAAAGAT AGACGGTATC TGGTATTACT TTGTGAACTG GGGTGGCATG GTCACTGGAT CATATACGAT CGACGCCATC GAATATCTCT TTGATTCATC AGGAGCTTGG CAAAGCTAA
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Protein sequence | MNRSYTSSSY ATRHTNAPIR IAGAFLLAGM LALSTMPDLA WATATNSSSR DTSTSTQVTS TTSSSPTQAQ RSDSFTQTTS AQQTDEIDAA LSDSSTAADA TQTSSAQAAD TAKAAENSWR YRDGVRLYTD GTTEKSLDTT ETQSKSASSQ SRPSNRPAGT QLSKWSLTSE GAVSPTGEVI EGATAIGIDV SHHQGTINWE KVKAAGIDFV ILRCGQSTNI NDRQWKRNVG ECERLGIPYG VYLYSTATTV DEARDEAQRT LRDLAGHSPS YPVYFDLEES DLASTDNRQL LADMAQAYCD IIEDAGYTPG VYANVNWWNN YLTDSVFDQW DRWIAHYRNY QSSYKKAYHL WQCSDVERVD GIIGNVDLDF EFGGTPYPSK YTWIEDSHGW WLKRADGSYP ASAWEKVNGT WYYFDSEGYL ASGWQKLNGS WYYLNPDHDG TFGAMQTGWQ KIDGIWYHFA SWGGANVGWQ QVDGTWYHFD LSGGMETGWL QLDGSWHYFA WWGGMRTDWQ EIDNTWYYFD SEGILLSGWQ KIDGSWYYLN PNHDGTFGAM QTGWQKIDGI WYYFVNWGGM VTGSYTIDAI EYLFDSSGAW QS
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