Gene Ccur_08300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08300 
Symbol 
ID8375038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp947152 
End bp948930 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content51% 
IMG OID644993752 
Productglycosyl hydrolase family 25 
Protein accessionYP_003151214 
Protein GI256827255 
COG category[R] General function prediction only 
COG ID[COG5263] FOG: Glucan-binding domain (YG repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value0.39526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA GTTACACTAG TTCTTCGTAT GCCACACGGC ATACGAATGC ACCCATCCGT 
ATAGCAGGTG CTTTTCTTCT TGCTGGCATG CTTGCTCTGT CAACTATGCC GGATCTCGCA
TGGGCTACTG CCACAAATTC GTCTAGTAGG GATACTTCTA CTTCCACCCA GGTAACCAGC
ACCACCTCCT CATCTCCCAC ACAAGCACAG CGCAGCGATT CATTTACACA AACAACAAGT
GCTCAACAGA CAGATGAGAT CGATGCAGCC CTGAGCGATT CCTCTACCGC CGCTGATGCA
ACACAGACAT CATCTGCACA AGCAGCTGAC ACAGCAAAAG CAGCAGAAAA CAGCTGGCGG
TATCGCGATG GGGTACGGCT GTACACAGAC GGTACTACCG AAAAATCACT GGACACCACC
GAAACGCAAA GTAAATCCGC CAGTAGCCAA TCACGTCCAT CGAATCGACC AGCTGGCACC
CAACTTTCAA AATGGAGCCT CACGAGTGAA GGGGCTGTCT CCCCCACGGG CGAAGTGATT
GAAGGAGCAA CAGCTATTGG CATTGACGTC AGTCACCATC AAGGCACGAT TAACTGGGAA
AAGGTAAAGG CTGCCGGTAT CGATTTTGTT ATCTTACGCT GCGGTCAAAG CACCAATATC
AACGACCGCC AATGGAAACG CAACGTCGGT GAATGTGAAC GCCTTGGCAT TCCCTACGGT
GTCTATTTAT ACTCCACGGC CACTACCGTT GATGAAGCGC GCGACGAGGC ACAGCGAACC
CTGCGCGACC TTGCTGGCCA CAGCCCTTCG TACCCTGTGT ACTTCGACCT TGAAGAATCG
GACCTCGCAT CAACCGATAA TCGCCAGTTA CTTGCCGACA TGGCTCAGGC ATACTGCGAC
ATCATCGAAG ATGCAGGCTA TACACCTGGT GTATATGCGA ACGTCAACTG GTGGAATAAC
TATCTGACCG ATTCGGTATT TGATCAGTGG GATCGCTGGA TTGCACACTA CCGCAACTAT
CAGTCTTCCT ACAAAAAGGC ATATCACCTA TGGCAATGCT CTGATGTCGA GCGTGTCGAC
GGCATTATCG GCAACGTTGA TCTCGACTTT GAATTTGGCG GCACGCCCTA TCCCTCAAAA
TATACGTGGA TTGAAGATAG TCACGGTTGG TGGCTGAAAC GAGCCGACGG AAGCTATCCT
GCCTCTGCCT GGGAAAAAGT AAATGGCACG TGGTACTATT TCGATTCAGA GGGCTATCTT
GCTTCCGGTT GGCAAAAGCT GAATGGCTCG TGGTACTACT TGAACCCTGA TCATGACGGT
ACGTTTGGCG CCATGCAGAC CGGCTGGCAA AAGATAGACG GTATCTGGTA TCACTTTGCA
AGCTGGGGTG GCGCGAATGT CGGGTGGCAG CAGGTAGATG GCACGTGGTA TCACTTCGAT
TTATCTGGTG GCATGGAAAC GGGCTGGTTG CAATTAGATG GCTCATGGCA TTACTTTGCC
TGGTGGGGTG GCATGCGCAC CGACTGGCAA GAAATCGATA ATACCTGGTA CTACTTCGAT
TCAGAAGGTA TTCTTCTGTC GGGTTGGCAG AAAATAGATG GTTCGTGGTA CTACTTAAAC
CCCAACCATG ATGGCACATT CGGCGCCATG CAGACCGGCT GGCAAAAGAT AGACGGTATC
TGGTATTACT TTGTGAACTG GGGTGGCATG GTCACTGGAT CATATACGAT CGACGCCATC
GAATATCTCT TTGATTCATC AGGAGCTTGG CAAAGCTAA
 
Protein sequence
MNRSYTSSSY ATRHTNAPIR IAGAFLLAGM LALSTMPDLA WATATNSSSR DTSTSTQVTS 
TTSSSPTQAQ RSDSFTQTTS AQQTDEIDAA LSDSSTAADA TQTSSAQAAD TAKAAENSWR
YRDGVRLYTD GTTEKSLDTT ETQSKSASSQ SRPSNRPAGT QLSKWSLTSE GAVSPTGEVI
EGATAIGIDV SHHQGTINWE KVKAAGIDFV ILRCGQSTNI NDRQWKRNVG ECERLGIPYG
VYLYSTATTV DEARDEAQRT LRDLAGHSPS YPVYFDLEES DLASTDNRQL LADMAQAYCD
IIEDAGYTPG VYANVNWWNN YLTDSVFDQW DRWIAHYRNY QSSYKKAYHL WQCSDVERVD
GIIGNVDLDF EFGGTPYPSK YTWIEDSHGW WLKRADGSYP ASAWEKVNGT WYYFDSEGYL
ASGWQKLNGS WYYLNPDHDG TFGAMQTGWQ KIDGIWYHFA SWGGANVGWQ QVDGTWYHFD
LSGGMETGWL QLDGSWHYFA WWGGMRTDWQ EIDNTWYYFD SEGILLSGWQ KIDGSWYYLN
PNHDGTFGAM QTGWQKIDGI WYYFVNWGGM VTGSYTIDAI EYLFDSSGAW QS