Gene Ccur_08060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08060 
Symbol 
ID8375014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp921795 
End bp923003 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content49% 
IMG OID644993729 
Producttranscription termination factor NusA 
Protein accessionYP_003151192 
Protein GI256827233 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0969065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones100 
Fosmid unclonability p-value0.170976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTT CTGAGCTTAT CGAGGCATTA CATGCTTTAG CGCATGAACG CAAGATTGAT 
GAATTTTATC TGATCGAGCG TTTAGAGGCT TCGCTGGCAA AGAGCTATCA GAACATTCTC
GATCTCGAAT GGGATGCTCG TGTCACAATC GATCGCAACA CGGGCAAAAT TTACGTTTAT
GAATTGGTGC CGCAGGGCGA ACCCGATCCT GAAACAGGTG AATATACCGA TTTCGAAGAA
CGCGATGTGA CACCTGATGA TGTTAGCCGT ATTGCGGCGC AGAATGCAAA AGGTGTTATC
AACGCCATTG TGCGTGAAGC GGGTCGTCAG TCTATTTACG AAGAGTTTAG CCAGCGGGTG
GGCGACTTAG TCACCGGTAC CGTCCTGCAG GGCACTCCTG ATTTCACCAT TATCAAGATT
CGTGACGGCG TTGAAGCGGA ACTACCTCAT TACGATCAGA AGCGTTTTCC TGACGAACGT
AACGAACGTC CGGCTAACGA GCGCTATCGT CATAATCAGC GTTTAAAAAC CCTTATTATC
GAGGTACGAA ACCCCAATTC GGAAGAATCA CGGCAGCGTG GCGAACAGGC ACGTCCGTCT
ATCGTGGTAT CGCGTACCCA TCCCGACTTA ATCCGCCGTC TTTTTGAGAT TGAAGTTCCA
GAAATCTATG ACGGTGTGGT TGAAATTAAA TCAATCGCGC GCGAACCAGG TGCACGCAGC
AAGGTGGCAG TGGTTAGCCA CGAAAATCAT CTTGATCCTG TTGGTGCCTG TGTTGGCCCT
AAAGGTTCTC GTGTGCGTAT GGTCGTTGAA GAATTACGCA ACGAACGAGT TGATGTCATC
CAGTGGAGTG ATGATGCGGC AACGTATGTG CGCAACGCTC TTTCGCCTGC TCGTGTTTCT
CACGTTGATA TCGATGAAGA AACGCATTAC GCAACCGTTA TCGTTCCGGA TGATCAGCTT
TCTTTAGCGA TCGGCAAAGA AGGTCAGAAT GCTCGATTAG CTGCTCGCCT TACCGGTTGG
CATATCGACA TTAAATCATC GTCATTTGCT GGCGAGCCGG TTGTTTCTGA AAACATTCTG
ATCGACGAAG AACCCGATGA CGCTGTTTCC GGACAATGTG AGTTTATCGA TGAAGAGGGC
GTGCGCTGTC GTAACCACGC GCGTCCAAAC AGCCGCTTCT GCGGCATTCA TTCTCAGGCA
GAGAAGTAA
 
Protein sequence
MATSELIEAL HALAHERKID EFYLIERLEA SLAKSYQNIL DLEWDARVTI DRNTGKIYVY 
ELVPQGEPDP ETGEYTDFEE RDVTPDDVSR IAAQNAKGVI NAIVREAGRQ SIYEEFSQRV
GDLVTGTVLQ GTPDFTIIKI RDGVEAELPH YDQKRFPDER NERPANERYR HNQRLKTLII
EVRNPNSEES RQRGEQARPS IVVSRTHPDL IRRLFEIEVP EIYDGVVEIK SIAREPGARS
KVAVVSHENH LDPVGACVGP KGSRVRMVVE ELRNERVDVI QWSDDAATYV RNALSPARVS
HVDIDEETHY ATVIVPDDQL SLAIGKEGQN ARLAARLTGW HIDIKSSSFA GEPVVSENIL
IDEEPDDAVS GQCEFIDEEG VRCRNHARPN SRFCGIHSQA EK