Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_08060 |
Symbol | |
ID | 8375014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 921795 |
End bp | 923003 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644993729 |
Product | transcription termination factor NusA |
Protein accession | YP_003151192 |
Protein GI | 256827233 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0969065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 100 |
Fosmid unclonability p-value | 0.170976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACTT CTGAGCTTAT CGAGGCATTA CATGCTTTAG CGCATGAACG CAAGATTGAT GAATTTTATC TGATCGAGCG TTTAGAGGCT TCGCTGGCAA AGAGCTATCA GAACATTCTC GATCTCGAAT GGGATGCTCG TGTCACAATC GATCGCAACA CGGGCAAAAT TTACGTTTAT GAATTGGTGC CGCAGGGCGA ACCCGATCCT GAAACAGGTG AATATACCGA TTTCGAAGAA CGCGATGTGA CACCTGATGA TGTTAGCCGT ATTGCGGCGC AGAATGCAAA AGGTGTTATC AACGCCATTG TGCGTGAAGC GGGTCGTCAG TCTATTTACG AAGAGTTTAG CCAGCGGGTG GGCGACTTAG TCACCGGTAC CGTCCTGCAG GGCACTCCTG ATTTCACCAT TATCAAGATT CGTGACGGCG TTGAAGCGGA ACTACCTCAT TACGATCAGA AGCGTTTTCC TGACGAACGT AACGAACGTC CGGCTAACGA GCGCTATCGT CATAATCAGC GTTTAAAAAC CCTTATTATC GAGGTACGAA ACCCCAATTC GGAAGAATCA CGGCAGCGTG GCGAACAGGC ACGTCCGTCT ATCGTGGTAT CGCGTACCCA TCCCGACTTA ATCCGCCGTC TTTTTGAGAT TGAAGTTCCA GAAATCTATG ACGGTGTGGT TGAAATTAAA TCAATCGCGC GCGAACCAGG TGCACGCAGC AAGGTGGCAG TGGTTAGCCA CGAAAATCAT CTTGATCCTG TTGGTGCCTG TGTTGGCCCT AAAGGTTCTC GTGTGCGTAT GGTCGTTGAA GAATTACGCA ACGAACGAGT TGATGTCATC CAGTGGAGTG ATGATGCGGC AACGTATGTG CGCAACGCTC TTTCGCCTGC TCGTGTTTCT CACGTTGATA TCGATGAAGA AACGCATTAC GCAACCGTTA TCGTTCCGGA TGATCAGCTT TCTTTAGCGA TCGGCAAAGA AGGTCAGAAT GCTCGATTAG CTGCTCGCCT TACCGGTTGG CATATCGACA TTAAATCATC GTCATTTGCT GGCGAGCCGG TTGTTTCTGA AAACATTCTG ATCGACGAAG AACCCGATGA CGCTGTTTCC GGACAATGTG AGTTTATCGA TGAAGAGGGC GTGCGCTGTC GTAACCACGC GCGTCCAAAC AGCCGCTTCT GCGGCATTCA TTCTCAGGCA GAGAAGTAA
|
Protein sequence | MATSELIEAL HALAHERKID EFYLIERLEA SLAKSYQNIL DLEWDARVTI DRNTGKIYVY ELVPQGEPDP ETGEYTDFEE RDVTPDDVSR IAAQNAKGVI NAIVREAGRQ SIYEEFSQRV GDLVTGTVLQ GTPDFTIIKI RDGVEAELPH YDQKRFPDER NERPANERYR HNQRLKTLII EVRNPNSEES RQRGEQARPS IVVSRTHPDL IRRLFEIEVP EIYDGVVEIK SIAREPGARS KVAVVSHENH LDPVGACVGP KGSRVRMVVE ELRNERVDVI QWSDDAATYV RNALSPARVS HVDIDEETHY ATVIVPDDQL SLAIGKEGQN ARLAARLTGW HIDIKSSSFA GEPVVSENIL IDEEPDDAVS GQCEFIDEEG VRCRNHARPN SRFCGIHSQA EK
|
| |