| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_07990 |
|---|
| Symbol | |
|---|
| ID | 8375007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 913300 |
|---|
| End bp | 915228 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644993722 |
|---|
| Product | DNA primase, catalytic core |
|---|
| Protein accession | YP_003151185 |
|---|
| Protein GI | 256827226 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 97 |
|---|
| Fosmid unclonability p-value | 0.160485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCG TGGCGGGCAT CAGCGATGAA GACATACAAA AGGTGCGTGC CGCTACGGAT
CTCGTTTCAC TCTTTTCAGA GCGGGTTCCC CTGCGTCAGC GGGGTCGTGA TTTCTGGTGT
TGCTGTCCCT TCCATGACGA AAAATCGCCG TCGTGCAAGA TAGATCCAGC CACGCAGCAG
TTCTATTGCT TTGGGTGTCA CGAGCATGGT GACGTGTTCT CATTCGTCAT GAAAACTGAA
GACATTGACT TTCCTGATGC GGTACGTCGT CTAGCTGATC GTGCCCACAT TGAACTACAT
GAAAGTGGTG GCCGCGGTGG GGTTTCACGC AGCTACAAAG AACGCCTGCG GGGTGTGTGT
CAGGAAACGC GTGATTTTTA TCATCAGCAG CTCATGCGCT TGAAATCTCC TGAAGCCGAT
GCGGCACGGA GCTATCTTGC GTCGCGCGGT CTTGGCGGTC AGGTTCCTGC TCACTGGCAT
TTAGGGTTTG CACCGGGTCA TGGTGTTCTT ATGCGCCATC TGCGATCGCG CGGTTATACG
GTCAAAGAAA TGGTCGATGC CAATGTCGTT GTTTCCCGTG ACAACGCGAC GCCCCGTGAT
CGGTTTTTTA ATCGCATTAT GTTTCCCATT CACGACGAAC AGGGGGAATG TATTGCCTTT
GGCGGGCGTG TTGTTGGGTC GGGCGAACCG AAGTACCTCA ACAGCCAGGA TACTCCCTTG
TTCCATAAAT CAAATATTCT GTTTGGTCTT GATGCCGCTA AGGCAGCTAT GACTGCCAGC
GGCCAGGCGA TTGTGGTTGA GGGGTATACC GATGTCATCG CGCTGTCTGA GGCGGGGGTT
AAAAACGTGG TGGCAACCTT AGGAACGGCG TTGACCACAC AGCATATTCG TTCATTATCA
CGCCATGCTG GTCAGCGCGT TATATACCTG TTCGATGGCG ATGAAGCTGG TCAGCGAGCA
ACGGATCGTG CGCTTGGGTT TATCGATGAA TCTATGACAC CTGAGGCGGG AAAGGTTCGG
ATAGACCTAC TGGCTTGTAC TTTGCCTGAT GGCCTTGATC CGGCCGATTT TGTCGACAAG
TATGGTGCTG ATGAATTACG AGCGGAGCTT AAACAGGCAA AACCGTTAAT CGCTTTCGGT
ATCGATCGCC ATCTTGCTCA GTTTGACCTT TCAACGCCCG AGGGGCGGAC GGCTGCATTT
GCTGATGCGT TGGCTTTACT TGCACCTATT AAGGATTCTC TGCTTGCGCA GGATTATGCT
GTGCAGATTG CGGGGCGTCT TCATTTTCGT GAAGATGATG CGCTTGAACG TCTTTCACGC
CTGCAGCCAC CTCGCCGTGC GCAGGTTGCT TCGTCGTCAA GTTCTTCGCG CAACGCAGAT
CATCAAGATC GTCAGGTTGC ATTGTCATCT CAACCGCAAA CGACCTCGTC GGTCAAGCCT
GCTGCTTTAC CGCAGAGCGA ACGGACACGT CGTCGTTTTG AAGCCGCGCT GATACGCGTC
TGTGCTCATC ATCCGCACCT GACGCTTACC CATGCGGATG CGCTTGCTCA GACAAACTGG
CATGAAGCAC TTCATGCGCA GGCTGCCGAT GCTCTCTTAG ATTGTGTGGC GAAAAACCCG
ACTGCTTCAC CAGCTGAAGC TGCTGCTGCC ATTACTCAAC GTGCCCCTGA TGCAACGGTG
TTATTAGTAA GTCGTTCTCC CGATCCATCT GATATCGCTG CTTTTGCTGC ATACCTTGTT
GAAGAACTTT CTTTAGGTGA CTTGTCAGAT ACGATAGATG CATATCGGAG TCAGCTCGCC
CGTCCAGACG GTCTCGACAG TCAAGAGCGG GAACTCCTGT TTCAGACGGT TGCGGGCATG
CAACGTGATT TGGCGGTGCG CAGGCAGGCT CAACGCGATC GCAGTACGTT TACGTTTGGG
GAAACGTAA
|
|---|
| Protein sequence | MARVAGISDE DIQKVRAATD LVSLFSERVP LRQRGRDFWC CCPFHDEKSP SCKIDPATQQ
FYCFGCHEHG DVFSFVMKTE DIDFPDAVRR LADRAHIELH ESGGRGGVSR SYKERLRGVC
QETRDFYHQQ LMRLKSPEAD AARSYLASRG LGGQVPAHWH LGFAPGHGVL MRHLRSRGYT
VKEMVDANVV VSRDNATPRD RFFNRIMFPI HDEQGECIAF GGRVVGSGEP KYLNSQDTPL
FHKSNILFGL DAAKAAMTAS GQAIVVEGYT DVIALSEAGV KNVVATLGTA LTTQHIRSLS
RHAGQRVIYL FDGDEAGQRA TDRALGFIDE SMTPEAGKVR IDLLACTLPD GLDPADFVDK
YGADELRAEL KQAKPLIAFG IDRHLAQFDL STPEGRTAAF ADALALLAPI KDSLLAQDYA
VQIAGRLHFR EDDALERLSR LQPPRRAQVA SSSSSSRNAD HQDRQVALSS QPQTTSSVKP
AALPQSERTR RRFEAALIRV CAHHPHLTLT HADALAQTNW HEALHAQAAD ALLDCVAKNP
TASPAEAAAA ITQRAPDATV LLVSRSPDPS DIAAFAAYLV EELSLGDLSD TIDAYRSQLA
RPDGLDSQER ELLFQTVAGM QRDLAVRRQA QRDRSTFTFG ET
|
|---|
| |