| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_07670 |
|---|
| Symbol | |
|---|
| ID | 8374975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 880437 |
|---|
| End bp | 881219 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644993690 |
|---|
| Product | conserved hypothetical protein TIGR00046 |
|---|
| Protein accession | YP_003151153 |
|---|
| Protein GI | 256827194 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 109 |
|---|
| Fosmid unclonability p-value | 0.437211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGG CACGCTTCTT TCTTCCTTCT CAGGTGCTTG CCTGTGAACA GGAAAGTCCC
TTTATTTTGC GTCTTTCTGC CGAAGATGAA CACCACGCGC GGGTCTTGCG TCTTGCAGCT
GGTGAACATG TGGCTGTTGT TGATGCGGCA CAAGACTACT TTGAGTGCGA GATTGTTTCC
TTCTATGCAG CAGGCATGTG CGTGCGTATT GCGGCGCATA ATTCTGCTTC TGTCGACCGT
CCCCAGGTAT GTCTGTTGCA GGGTATTTCA AAAGGTGACA AGGTTGATGT TGTTATACGG
CACGCGACCG AGCTCGGTGT AACGCAGTTT GTACCGTTAG CCTGCGAGCG AAGTGTGGTG
AAACTTGACG GTGATAAAGC ACACAAGCGG GTCGGTCGGT GGCGTGCGAT TGCCAAAAGT
GCCGCTATGC AATCAGGGCA GCCGCGTATA CCTGAAGTTA CTCTTCCGTA TCGCTGCGAC
GAAGTGGCAG AGATACTTTC AGATGCTACG TGTATCCTTA TTTGTTGGGA AGAAGCACAT
GGCGTTGGCG TGTCTGAGGC AATTGCTCAA GCACTTCAGT TGAGTGGACA GACGGCTGCC
CACGCTCGCG TTGCGCTTGT CATCGGCCCT GAGGGTGGTC TGACGCAACA TGAAGTGGAT
TATTTCTTGC ATATGGGACC ACCGGCTTAC GCCGTAACTC TGGGGTCTTC CATCTTGCGC
ACTGAAACAG CGGGTATTGT GGCGCCAGCG CTTGCTCTGT CGACTCTGGG TGTCCTGCAA
TGA
|
|---|
| Protein sequence | MSLARFFLPS QVLACEQESP FILRLSAEDE HHARVLRLAA GEHVAVVDAA QDYFECEIVS
FYAAGMCVRI AAHNSASVDR PQVCLLQGIS KGDKVDVVIR HATELGVTQF VPLACERSVV
KLDGDKAHKR VGRWRAIAKS AAMQSGQPRI PEVTLPYRCD EVAEILSDAT CILICWEEAH
GVGVSEAIAQ ALQLSGQTAA HARVALVIGP EGGLTQHEVD YFLHMGPPAY AVTLGSSILR
TETAGIVAPA LALSTLGVLQ
|
|---|
| |