Gene Ccur_07060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_07060 
Symbol 
ID8374914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp817960 
End bp818907 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content50% 
IMG OID644993629 
Productsite-specific recombinase XerD 
Protein accessionYP_003151098 
Protein GI256827139 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value0.273434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA AACATCAGAC AGAATCCCAT AGTGCTGAGT TACTTGTTGC ACGCTATCTC 
GAAGAATTGA CGAGCACTGG CCGTGCTTCA GCGCATACCA TACGTAACTA CGGCAACGAT
CTTGCCGACT GGCTTCGTTT TGCCGAACGC TCAAATATAA ACGCGCTTGA ACCGTCGCAT
CGAGACATTC GGCTTTATCT GGTTGATCTT GATGCTGCTC GCTATGCAAA GGCGACAATC
AATCGCCGCT TAAGTTCGTT ACGTGGCTTT TTCAGATGGG GCCAAATTGC AGGATTATTC
GAACATAATC CTGCTGAAGC AGTATCGTCA CTCAAAGAGG GAAAGCATTT ACCGCATCGG
ATACCACCTT CCGATATGGT GCGCATTTTA CGTGTTAATG GCCCGCGCGA TGAGCAAGGA
AAAACACGCC TGCAAACACC GATACAAATG CGTGATCAGG CAGTGCTTGA ATTTCTCTAC
GCCTGTGGTG CTCGTATATC AGAAGCGGCT GCACTAACCG TGGATGCTGT TGATCTCGAC
AGAGGTACTG CCCGACTGTT CGGCAAGGGG AGTAAAGAGC GGGTTGTGTA CTTACATGCT
CTCGCCATCG AAAGTATGGG TGCCTACCTC CATTTTGCTC GCAACGATCT GTTGCGCGGG
CGCACTGATC CGGGGTATTT CTTCCTTTCG ACTCGGGGAT TGCCGATGAA TACCGACGCG
ATACGCAAGA TGTTTAAGAC AACACTTATC CAAGCTGGGG TGCGCGCTGC ATACACGCCA
CACGATATGC GTCATACGTT TGCGAGCGAC TTGCTTGAAG GTGGTGCAGA CCTGCGAAGT
GTTCAGGAAT TATTGGGTCA TTCAAGCCTT TCGACCACTC AGATATACAC ACATGTTTCA
ATTGCGCAGA TGCGAAAAGT TCATAAGCAA GCGCATCCGC GTGCATGA
 
Protein sequence
MTTKHQTESH SAELLVARYL EELTSTGRAS AHTIRNYGND LADWLRFAER SNINALEPSH 
RDIRLYLVDL DAARYAKATI NRRLSSLRGF FRWGQIAGLF EHNPAEAVSS LKEGKHLPHR
IPPSDMVRIL RVNGPRDEQG KTRLQTPIQM RDQAVLEFLY ACGARISEAA ALTVDAVDLD
RGTARLFGKG SKERVVYLHA LAIESMGAYL HFARNDLLRG RTDPGYFFLS TRGLPMNTDA
IRKMFKTTLI QAGVRAAYTP HDMRHTFASD LLEGGADLRS VQELLGHSSL STTQIYTHVS
IAQMRKVHKQ AHPRA