Gene Ccur_06870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_06870 
Symbol 
ID8374895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp799973 
End bp800827 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content53% 
IMG OID644993610 
Product(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase 
Protein accessionYP_003151079 
Protein GI256827120 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value0.337942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTA TTATCGCTTC GCGCGCGGGT GCTTGTTACG GCGTGCAGCG TGCGTTGAAT 
CTTGCGCAAA AGGCAGCCCA GTCGGGTGGC GACGTTCAGA CGCTCGGCTC GCTTATTCAT
AACCCACAGG TAGTTGCTGA ACTTGCTGCT TCGGGAGTTG AAGCCGTATC AAAGCCTGAA
GAACTTACCG CTTCACGTGC TATTATTCGC AGCCACGGAG TTACCCCACA AGTGCGTGAG
GGGATAGAGC AGGCTGGTGC CGATATTATT GATGCCACCT GTCCGCATGT ACTGCGTGCG
CAACAGGCAG CTCGTGATCT TGCGCTTGAA GGGCGCCTAG TTATTGTGGT GGGCGAAGAA
AGTCACCCTG AAGTTGAGGG ACTCCGCGCC TGGGCCGAGC AGGCTGGAGG ACAGGTTGTT
GTCGCTGCCA CACCAGACGA TGTGCCCTCT CAGATTGATG GATCGGTCGG TATTGTCGTG
CAGACAACTC AGCGACGCGA AAAACTTGAT GCCATTATTG ATGTACTTAA ATCACGCGGA
ATTGAAGCGG AGATACGTGA CACCATCTGC AGTGCCACGT CAACGCGACA AGAAGCCGCG
GCAGAGCTTG CAAGCCAAGT CGATGTTATG GTGGTAATAG GCGGGCATAA TTCTTCAAAC
ACTACTCGTC TCTTTGAAAT CTGTCGGGCA CGCAGTCCTC AGGCTTTTCA CATTGAATCG
CCCGACGAAT TGCAGGCCAT TGATTTCAAG GGAGCGCAAC GCGTTGGGGT AACAGCTGGT
GCTTCGACAC CTGAAGACCA GATCGAAAGC GTTATCGAAC GTCTGCGTTC TTTTGCTGAA
AGCCAAGAGG AATAA
 
Protein sequence
MEIIIASRAG ACYGVQRALN LAQKAAQSGG DVQTLGSLIH NPQVVAELAA SGVEAVSKPE 
ELTASRAIIR SHGVTPQVRE GIEQAGADII DATCPHVLRA QQAARDLALE GRLVIVVGEE
SHPEVEGLRA WAEQAGGQVV VAATPDDVPS QIDGSVGIVV QTTQRREKLD AIIDVLKSRG
IEAEIRDTIC SATSTRQEAA AELASQVDVM VVIGGHNSSN TTRLFEICRA RSPQAFHIES
PDELQAIDFK GAQRVGVTAG ASTPEDQIES VIERLRSFAE SQEE