| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_06680 |
|---|
| Symbol | |
|---|
| ID | 8374876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 778490 |
|---|
| End bp | 780067 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644993591 |
|---|
| Product | ABC-type dipeptide transport system, periplasmic component |
|---|
| Protein accession | YP_003151060 |
|---|
| Protein GI | 256827101 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000372543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 100 |
|---|
| Fosmid unclonability p-value | 0.255135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAGA ATCAATTGAC AGTGAGCCGT CGTAGCTTTG TAGCTGCGGG CGCAACTATG
GCTGCGGCGA TGGGCTTGGG CCTATCCGGC TGCGGATCGT CTTCCAACTC GATGAGTCAG
GGTGCTCAAG GCGGAGGCGA ACTGACAGCT GCTGTCGCGT ATGAGACGAA GAACTATCAT
CCATCCACCA CGTCATCTGC TCTTGCTATG GGTTCTAACT GGCATGTGGT TGAGGGTCTC
TACGAATTAA ATTTGAGCAC ATACACCCCG TATCAAGCGC TAGCTGCGGG CGATCCCGTT
AAGGTTTCCG ATACGGAATA CACGGTTAAG CTGCGCGATG ATGCAAAGTT TTCTGATGGT
ACTGCGGTAA CCGCTGCCGA CGTTGTTTCT TCATATGAGC GCATTATCGC TCAGAAGAGC
CTCTACATTC CGTTTTTAAC CTTTATCGAA AGCGTTACTG CTTCCGATGA TTCAACGGTT
GACTTCAAAC TGGCATATCC TTTTTCGTTG GTGAAGCAGC GCTTATCGCT TATCAAGGTT
GTTCCTTCGT CAGCAACCGA CGAAGAGCTG ACCGCTATGC CAGTTGGCTC AGGTCCGTGG
AAGTATGATT CCATCGACGA GAAGACCATC ACGTTTTCGC CTAACGAGAA CTATAACGGT
GAATTTTCTG CCTTTGATAA ATCGATGAAA TGGGACATCA TCAAAGATGA CACCGCTCGC
ACAACGGCGC TGCAAGAGGG TTCAGTTATG GTAATGGAAA GCGTTCCGGC CGATATGCAG
GCGCAGCTAC AGTCCGCCGG TGTGACCGTC GATAGCGTTC AGGGCTTCAA TCTGCCCTTC
CTTATGTTCA ACACGAAAAA GGCGCCGTTT GATGACAATC GCGTGCGCCA GGCATTCTTC
TATGCCATTG ATGTCGACAA GCTGATTGCA AATGCCATGA GTGGTTTGGC TGCAAAAGCA
ACGAGCTTTT TGCCGGAAAA CCATGCGAAT TATCATCGCG CTTCTACCGT GTTTGACCAC
GACACCGATA AAGCGAAGAG TCTTTTGGCC GAAGCGGGTG TCACCAATCT GAGCTTGACA
CTTGATACGA CCGACCATCC ATGGATTACG GCGCTGTCTG CTCAGGTCAA AAACGATCTT
GAAGCAACAG GCGTACTCAA GGTTGACATT CAGTCTCAGG CATCTTCGTC GTTGTATGCA
AACCGCACTG ACACCGACAA TCCTGAATTT GATGTGGTCA TGGCACCGGG CGACCCGTCG
GTGTTCGGCA ACGACCCCGA CCTGCTTATG AACTGGTGGT ATGGCGATAA TACTTGGACC
AAGAAGCGCA CACAGTGGGG CGGCAGCGAA AGCTACGAGA AGCTGCATAG CCTTATGCAG
CAGGCCGTTG AATCTGACGG CAGCACTCAA CAGACGCTCT GGAACCAGTG CTTTGACTTG
ATTGCCGAAC AAGTGCCGCT GTATCCGCTG TTCCACCGTC AGATGCTTAC TGGCTACTAT
GCCGATAGGA TTGCCGATTA CAAGCCTATT GGTACCACTG GTCTCAACTT TATTGGGGCT
GCCACCACAG GCAAATAA
|
|---|
| Protein sequence | MRKNQLTVSR RSFVAAGATM AAAMGLGLSG CGSSSNSMSQ GAQGGGELTA AVAYETKNYH
PSTTSSALAM GSNWHVVEGL YELNLSTYTP YQALAAGDPV KVSDTEYTVK LRDDAKFSDG
TAVTAADVVS SYERIIAQKS LYIPFLTFIE SVTASDDSTV DFKLAYPFSL VKQRLSLIKV
VPSSATDEEL TAMPVGSGPW KYDSIDEKTI TFSPNENYNG EFSAFDKSMK WDIIKDDTAR
TTALQEGSVM VMESVPADMQ AQLQSAGVTV DSVQGFNLPF LMFNTKKAPF DDNRVRQAFF
YAIDVDKLIA NAMSGLAAKA TSFLPENHAN YHRASTVFDH DTDKAKSLLA EAGVTNLSLT
LDTTDHPWIT ALSAQVKNDL EATGVLKVDI QSQASSSLYA NRTDTDNPEF DVVMAPGDPS
VFGNDPDLLM NWWYGDNTWT KKRTQWGGSE SYEKLHSLMQ QAVESDGSTQ QTLWNQCFDL
IAEQVPLYPL FHRQMLTGYY ADRIADYKPI GTTGLNFIGA ATTGK
|
|---|
| |