Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_06240 |
Symbol | |
ID | 8374832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 730817 |
End bp | 731482 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644993547 |
Product | predicted Zn-dependent protease |
Protein accession | YP_003151022 |
Protein GI | 256827063 |
COG category | [R] General function prediction only |
COG ID | [COG2738] Predicted Zn-dependent protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000728201 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 0.0055368 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTGAGCT ATTCTTATCT TCTTCTTATT GTGGCATCTA CTCTGATTGG TTTAGGTGCG CAGTTTTATG TGAATAACCA AATTAAAAAG TATTCGGAGG TCCCTTCAAC CACGGGTCTT TCGGGCGCTG AAGCGGCATC ACGCATGCTT GCGAGCCATT CGATTAGTGG GGTTCCCATC TATCAGGGGC GCGAGAGCGA AGATCATTTC GATCCACGGA GCAACTCCAT CACGCTTGAC CCGCATGCGT ATGGACAGCG CAGCATAACG GCGATTGCAA CAGGCTGTCA CGAAGCGGGA CATGCGTGCC AATATGCAAA AGGTTATGCG CCTATGAAGG TTCGCAGTGC GCTGGTGCCG GTGGTTAATC TCGCATCGAA CGCGTGGATG ATCTTACTTA TCCTGGGGTT TGCGCTTAAT TTAGCTGGTT TGATCGACCT TGCAATTATT CTGTATGCCT TTGCTGTCCT CTTTCAACTT GTAACGCTGC CTGTTGAATT TGATGCAAGC CGCCGTGCAC TTGACTATCT GAAGGCAAGC GGTCTTCCTC AGGGCGAACA AGCAGGTGCT TTTAGCGTAC TGCGTGCGTG TGCTCTTACC TATGTTGCAG CGGCGTTGGT GTCAGCTATG CAGCTTCTGT GGCTGCTTAA CCAACGTCAA AACTAA
|
Protein sequence | MLSYSYLLLI VASTLIGLGA QFYVNNQIKK YSEVPSTTGL SGAEAASRML ASHSISGVPI YQGRESEDHF DPRSNSITLD PHAYGQRSIT AIATGCHEAG HACQYAKGYA PMKVRSALVP VVNLASNAWM ILLILGFALN LAGLIDLAII LYAFAVLFQL VTLPVEFDAS RRALDYLKAS GLPQGEQAGA FSVLRACALT YVAAALVSAM QLLWLLNQRQ N
|
| |