Gene Ccur_05850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_05850 
Symbol 
ID8374793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp687303 
End bp688175 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content49% 
IMG OID644993508 
ProductLPS biosynthesis protein 
Protein accessionYP_003150984 
Protein GI256827025 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3475] LPS biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value0.000114788 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGAAAC TAAAACTCGA TGAAATTCGT GCTATTCAAA TGGATATCCT GCTGAGGGTC 
GACAAGCTCT GCCAAGAAGA AGACCTTGCA TACGAACTCG CGTATGGCAC GCTTATTGGC
GCAGTGCGAC ATCAGGGATA CATCCCGTGG GACGACGACA TCGATCTTAT TATGCCCTAT
CCCGATTATC GCAAGCTCAT AGACATCGTG AATAAACAAG GCACCGGTGG CATTCTTGAC
GGACGCTATC GCTTTGCGGC GGCACTTGTT GAGTCGGATT TGCCCTACCA CGCTTCATTT
ATGAAAGTAT ACGACAACCG AACACGTGCC GAATCTTCAG CCTTGAGGAG TAGTCAAGGC
TTTCGCGAAG GGGTATTTAT CGATATATTC CCACTATCAG GACTTCCTAC TAACGAAGCG
GATCGGACCG AAGTGCTTGA GCGTTTTCGA CGCATTAACG ACGGTCGCTA TTACTGCGTC
ACAAAGCCAC AACGCTGGGA GTTTAATCCA CTATATCCAA AACGAGCGGC AAAAAATGCA
TGGGGTTACT TAAGCGCCCG CTTTAAGCCC GCTTCTTGGT GGGTTGCTCG CTGCGCTGAC
GTACTCGAAA ACTTACCAGC GCCAGATGAT TCCCCCTGGA CCTGCGTACT GCCCAGTTGG
GGAGCAGACG GTAAAACCTT TCTTGAAGGA AACCCCTGGT TTCCCACGAA GCGTGTTTCG
TTTGAAGGAC ACGACCTTCC TATCCCAGAA AACTATGATT TTATTCTACA CCGTCAATAT
GGTGATTACC GAAAGCTCCC ACCAAAGGAA GAACAGGTCA CCAGCCATGA TCAAGATTTT
TATCTTCTGG AAGAAGGAGA CTTGGAGTCG TAG
 
Protein sequence
MRKLKLDEIR AIQMDILLRV DKLCQEEDLA YELAYGTLIG AVRHQGYIPW DDDIDLIMPY 
PDYRKLIDIV NKQGTGGILD GRYRFAAALV ESDLPYHASF MKVYDNRTRA ESSALRSSQG
FREGVFIDIF PLSGLPTNEA DRTEVLERFR RINDGRYYCV TKPQRWEFNP LYPKRAAKNA
WGYLSARFKP ASWWVARCAD VLENLPAPDD SPWTCVLPSW GADGKTFLEG NPWFPTKRVS
FEGHDLPIPE NYDFILHRQY GDYRKLPPKE EQVTSHDQDF YLLEEGDLES