| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_05450 |
|---|
| Symbol | |
|---|
| ID | 8374753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 642323 |
|---|
| End bp | 645046 |
|---|
| Gene Length | 2724 bp |
|---|
| Protein Length | 907 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644993469 |
|---|
| Product | DNA-binding transcriptional activator of the SARP family |
|---|
| Protein accession | YP_003150946 |
|---|
| Protein GI | 256826987 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 115 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGATT TTCTAGAGCA CTGTGCGTGT AACGGTTCAG CGCCGGAGCA ATTCTCAGAG
CGAAAAATGC TCTTCAGGAA TGCTCTTCTT GCTCGCATGA TGGCCGACAG AACTCGCGTG
CGCTATTTGG TTGCACCAGA ACTGTTTGGT AAGAGCTCTC TTGCCTGTAG CTATGCTCGT
TTCGTCTTTG CTTTCAATGA TGTTTGGTGG GTCAATGGAA AGAGTGCTTG CCTCTTACGC
GATCTGGATG ACGGAAGTCT TATGCAGGAC TTTCCGCAGG TTATTCCCGC TGGTGGGCTG
GTAGTGCTTG ATGATGTGCC ATCTTTAGGA AAAGATCGCG CTCAGAAATT TTGGGAATTC
TGCCAAACGA TGGTTACATC AGGTCGTGAG GTAGTGGTTG CTGCAACACC AGGTACTGAT
CCACTTGCAG CTTTTCGCTC TTCTTGTGTC GTCATTGGGT CGCGCGACCT GCTTTGCACT
GATGAAGAAT GCAGTGCGCT TGGTGTTCGA CCGCTAAGAA CGGAGTCATC CTTTCGCCTT
ATCGATCGAG TAGCAGGCCT CGCGCAACAT TCTTCGCCGC AATATGAACG GTTTCTTCAT
GCGCTTATTG CTGATGGGCA GCAGGATAGG GCGGTGCTTT CTTTTGTTGT TCTGTCGCTT
GAGGAAGCGA CAACGGATGA GATCGCCTGT GTGCTTAATA CCTCATTTGA TGTCACGGAT
ATCAATGTAG AATCGCTGCC ATTTATCCAG TTCAATGCCA CCACTTCAAC ATTCTCGGCG
AAGGGTTTCC CTCTGGCTTC CATTGTTCGT GCTTACGCTC CTTATTTCCA GAGCGATGCT
GGCGATTCGG GTTTGGGTCT TGATGATGTT TTGGTAGGAA GAGTGGCTGA TATTCTCATG
CGTAAAAGAC GCTTTGAGCG CGCATGTGGT TTCGTAGCTG CTCTTTGTTC GCCCTCAAAG
CGATCAGAAT GGCTTCGTCG CTGGCAAGAT GTTATGGCAG GTGCAGGGGC TCTTGCGCCG
GCAGAAGCGG TGTTTGCGAC GCTTACCCGC TATCGTGAGG GATCACATAT TGATCTTCAA
GTGGGTTCTC TGCTACGCCG CGTTATGGCA GGTGATCAAA CAGCCGCTTT GAAACTGCTG
CAATCTGCCC GTCGCTCTGA CTGCTCTTTA TCGTTGCGCC TGCGCTGCGC GTCGACCGCG
CTTATGGCAC CAGAACATTC CGCAGAAGTG TTACGAGACT TTTCGTTGAC GGAAGCAGCA
CATGCTCTTG CGTCAGTGGG CGGTGAATCA AGCCTTTCCA GCCAAGTGCG CGCCCTGCTC
GTTTTCTGGC AGCACATTAT GCACTCAGAA AACGAAGAGC TCGATCTGCT TTCGGTGGCT
CGTCATCTTG ATGCGGATAG CACTTCAGAC GATGCGGCGT GGGCCTTTGC CTGTTTGCTG
CGGGTACGTG GTACGTGCGA CAGTCACACG TGTGCATCGA TAGCACAGTA CTTACACACC
TTACCGCAGG CAGAGGGAGG AATTGGTTTT ATCTTTTTGC ATCGGTTACT TGCTGAATTG
CAACTTGATA AAGCCAGTAT TGCAGCAGTG CCGATGAGTG ACATGTGTCA AAAACTTCAG
GCGAAACTTA ATACGCAGCG TGAACTGTTT GCGCGCCTCG TTCCAGAAGG AGATTTCCAT
ACGCCCACAT CAAAGGAAAG CCTTCGTCTC GCTGGACTCA AGGAAAATTC TTCTCTATCT
GCGCACGAAG AAGATTCACA AGCATTTGCC TCAGAGGGAA GCTCGCGCAT GTCTGTTTCA
GAGGAATTCA CTCGTTGTGC TTCTACCACA CTGGATTATT CTGTTTCTAC TACATCAAAT
CACGCGACTT TCGGAGCGAC CCATTGCACT CAGAGACCTT CAAGTACTGC CAATGCGATG
GCAACTGCTT CTTCGGTAGA CAATCCGCCT GATATAACAC CTCTTTTACA GGTGCGCTTG
TTCGGTTCAT TCTCGGTATC TCATGGGGAA GAGCCAGTTG ATATGGCGCG ACTGAGTCGG
CAAAAGACGC GGGCACTGTT GGCGATTCTC CTGCTGTATC CGGGGCAGGA TATACCGGGC
GATACGATTG CTTTCATGTT GTGGCCGCGC AGTGATGGGG CTAAAGCACG GCGCAATATG
TACAGCGTGC TCTCAAAACT GCGTGGTGCC CTAAAGCTTC CCGATGGTAC CTGTCCGTAT
CTCAAGCGAG CTCAAGGTGT GGTGGCGCTG GTTCCTTCGC TGGTCAGAAG CGATTGTGAC
CAAGTGGGTG CACTCTGTCG TAGTCTGCGA TTTGACCATC TTGAACCAGC GGCCATTGTG
GATGCATTTA ATGCCTTGCG CTTGCAGTAT GCAGGTGAAT TCCTGCCCGG CAATATTGAA
GACGAACCCA TTGCCCGTGC CCGTCGCTTG TGGCAGGGGC GTACGGTAGA TGCGGCACTG
CATGCAGCCC AGCGGCTTGA GGAAGCGGAC TGCCTGCAGG AAGCTCTCAG CGTTGCTGAG
CAAGCACTTG AATGGGATAC CCATCGTGAA GATTGTCACG GACGACTCAT GCGCCTGCAA
GCTCGTTGCG GTCAGCGTCC GGCGGCGGTG GAAACATGGT TACGCTATCT GGACATGATG
CGTGCATTTG GGCTGGATGC CTCGAAGACA ATGAATGCGC TGTACGAAGA AATAATAGGG
AATTCTCTTG GGGTCATAGC GTAG
|
|---|
| Protein sequence | MYDFLEHCAC NGSAPEQFSE RKMLFRNALL ARMMADRTRV RYLVAPELFG KSSLACSYAR
FVFAFNDVWW VNGKSACLLR DLDDGSLMQD FPQVIPAGGL VVLDDVPSLG KDRAQKFWEF
CQTMVTSGRE VVVAATPGTD PLAAFRSSCV VIGSRDLLCT DEECSALGVR PLRTESSFRL
IDRVAGLAQH SSPQYERFLH ALIADGQQDR AVLSFVVLSL EEATTDEIAC VLNTSFDVTD
INVESLPFIQ FNATTSTFSA KGFPLASIVR AYAPYFQSDA GDSGLGLDDV LVGRVADILM
RKRRFERACG FVAALCSPSK RSEWLRRWQD VMAGAGALAP AEAVFATLTR YREGSHIDLQ
VGSLLRRVMA GDQTAALKLL QSARRSDCSL SLRLRCASTA LMAPEHSAEV LRDFSLTEAA
HALASVGGES SLSSQVRALL VFWQHIMHSE NEELDLLSVA RHLDADSTSD DAAWAFACLL
RVRGTCDSHT CASIAQYLHT LPQAEGGIGF IFLHRLLAEL QLDKASIAAV PMSDMCQKLQ
AKLNTQRELF ARLVPEGDFH TPTSKESLRL AGLKENSSLS AHEEDSQAFA SEGSSRMSVS
EEFTRCASTT LDYSVSTTSN HATFGATHCT QRPSSTANAM ATASSVDNPP DITPLLQVRL
FGSFSVSHGE EPVDMARLSR QKTRALLAIL LLYPGQDIPG DTIAFMLWPR SDGAKARRNM
YSVLSKLRGA LKLPDGTCPY LKRAQGVVAL VPSLVRSDCD QVGALCRSLR FDHLEPAAIV
DAFNALRLQY AGEFLPGNIE DEPIARARRL WQGRTVDAAL HAAQRLEEAD CLQEALSVAE
QALEWDTHRE DCHGRLMRLQ ARCGQRPAAV ETWLRYLDMM RAFGLDASKT MNALYEEIIG
NSLGVIA
|
|---|
| |