Gene Ccur_04760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_04760 
Symbol 
ID8374684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp564534 
End bp566255 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content51% 
IMG OID644993400 
Productpredicted xylanase/chitin deacetylase 
Protein accessionYP_003150880 
Protein GI256826921 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000622168 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones118 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAC AGAGTAAATA CGAAAATCAC CATCGCGAAC GTCCTGTTGT CCATAAGCGG 
ACAAAGCGTA CCGAACGAGA GAAGCACAAT GCTGAAGCGG AGGGAAATCT TCCTTCAACA
CACGACCAAG ATACCGCTTC GTTCCCGCCT GTTACAAGCC AGCCAGAGAC AATGCCAAAA
GACTCGTATC GAGGTCAGAG GCCCCATCTC ACCTCGGTTC CCGACCCACA GGTTACAGCT
CATGCGTCTA TATCGTCGGA AAACAATCTC GCACATGAAA CCAGTTCCGC TACACGGGAA
CCGCGTCAGC ATCGTGCGCC TATTTCTCAG GTTTCTTCTG TTGAATCAGC ATCTGCTGTT
GCTCAGGGCA ACAACACTGC AGCACCTAAC GCTGCACAGG GCGATAATGT CAAAGCACCT
AGTGCTATGT CGGGCAGCAA CCCTGCCGCC GCTGTCCATG CGCAATCCTA TCAAGAATCA
ACCGAGCAAG GGTCGTCGTT TGTACCGGTT GGCGCACATA TCCGCGACTA TAATATGGCC
GCTGCACACA GTCGACAGCA TCTTGGCATT GGCGTCAAAA TATTTTTTGT TCTTATAGCA
GCTGGCGTTG TTGCCATTGT ATGCTGGTGG ATGCTCTTCT CCCCGATTAG CATTACCTTA
AATGGCAAAA TGACAACTGT CGATCGTGGC TCGAATGTAT CCGCTATTGT AAAATCGCAA
AATGTAAATG TATCCCCTGG TCGATTGCTT GCTGTTGATG GATCAGTTAT CGACCAGACG
GGCGGTGAGA CCTTTACCGC AACGCTCGAT GGACAGGCAG TCAATGGAAA TGCTGGCGTA
AAAGAAAACA GTACACTCAC CATTACCGAT GGCGCCGATA AAACAGAGGA TTATACCGAG
ACAACCAAGC CAATCCCTTC TCAGTGGGTT GACGATGGAA CGCGCGGTGC CTTCCATGAG
GTTGTCGGCG AGGCAGCTGA CGGCATTGCC GCTACCCGCA CAGGCAAAAC ATCAGGCATT
ACCGTCGACA ACCAGGTTGT CAAAGAGCCT GTTAACCCCA CGCTCACTCG GTACAGCATC
GACACGGGTG GTGAGAAAGT TATCGCACTG ACATTTGACG ATGGCCCCTG GAAAGATCAA
ACGGCCGAGC TGCTCGACAT TCTTGATCAA AATAATGCCA AAGCAACCTT CTTTGTTGTT
GGCAATCGTA TTGGTGACAC TCCTGGTGGT GGCGATCTGG TTAAACGCGA ATATGACAGC
GGTCATCAGG TATCGAGCCA CACATGGGAT CATGCAGCAG GAAGTGGCAA GGGCGTCAAC
CTTGGCTATA TGACTGAAGA TGAGCAGATC AACGAAATCG TCAAGGGACA GCAGGCTATC
ACCGATGCCA CGGGCGTTGA GGCTAATAAA ATTGTGCGCA CGCCCGGAGG CAACTATTCA
CTGGAGACTG CCCAGATCGT GCATCCTTAT GTCGATGTCG AAGTTGACTG GAATATCGAC
ACTGAAGACT GGCGCCGTCC TGGCGCTGCA AAAATTGAAT CAGCCATTCT GTCGGCAAAG
CCAGGAAACG TCATTCTTAT GCACGACGGC GGCGGAGATC GCAGTCAAAC CGTACAAGCA
GTTGCGGATG CTCTACCAAA ACTGCGTGAA CAAGGGTATC GCTTTGTCAC TATTGAAGAG
CTTTGGGAGT ATCACAAGAA AGCCCAGCAG CAAAGTAATT AG
 
Protein sequence
MEEQSKYENH HRERPVVHKR TKRTEREKHN AEAEGNLPST HDQDTASFPP VTSQPETMPK 
DSYRGQRPHL TSVPDPQVTA HASISSENNL AHETSSATRE PRQHRAPISQ VSSVESASAV
AQGNNTAAPN AAQGDNVKAP SAMSGSNPAA AVHAQSYQES TEQGSSFVPV GAHIRDYNMA
AAHSRQHLGI GVKIFFVLIA AGVVAIVCWW MLFSPISITL NGKMTTVDRG SNVSAIVKSQ
NVNVSPGRLL AVDGSVIDQT GGETFTATLD GQAVNGNAGV KENSTLTITD GADKTEDYTE
TTKPIPSQWV DDGTRGAFHE VVGEAADGIA ATRTGKTSGI TVDNQVVKEP VNPTLTRYSI
DTGGEKVIAL TFDDGPWKDQ TAELLDILDQ NNAKATFFVV GNRIGDTPGG GDLVKREYDS
GHQVSSHTWD HAAGSGKGVN LGYMTEDEQI NEIVKGQQAI TDATGVEANK IVRTPGGNYS
LETAQIVHPY VDVEVDWNID TEDWRRPGAA KIESAILSAK PGNVILMHDG GGDRSQTVQA
VADALPKLRE QGYRFVTIEE LWEYHKKAQQ QSN