| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_04410 |
|---|
| Symbol | |
|---|
| ID | 8374649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 516722 |
|---|
| End bp | 518140 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644993365 |
|---|
| Product | arabinose efflux permease family protein |
|---|
| Protein accession | YP_003150846 |
|---|
| Protein GI | 256826887 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 108 |
|---|
| Fosmid unclonability p-value | 0.684912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGG TAAACACCCC CATTCAATCA GGAAATGCAC CACGCATCGT AGTTCTTATG
ACCTCGCTGC TTGTTGCTAT CTTTGCTTTC CAACTTAATG CATCGATGCT TTCGCCAGCG
CTCGTCACTA TGCAAAACGA ACTTGCAACC ACCGAAGCAG CCATCGGTCT GACACAGACC
GTATTCTTTA CGGCAGCTGC CCTGTTTTCG CTGTTTCTTC CCCGCTTAGC TGACCTTATT
GGACGGCGCA AGGTACTGGG CAGCATGCTT GCACTCACCG GCGTTGGCTG CCTTATTTCG
GCCATAGCTC CCGACGTCAA TATTCTGATG ATTGGACGTG TACTGCAGGG TGTATCAGGG
CCTGTTGTAC CAATGTGCTT AATTATGCTG CACGAAGAAG TAACTGATAC CGCGCGCTAT
ACTCGCCTTA TGGCAATTCT GACTTCCGTT AATGGTGGCA TCGCTGGCGT TGACGCAATT
CTCGGCGGTT GGCTCGCGGG AAACTTTGGC TTCCGTTCGG TCTTTTTAGC CATGGCGCTC
GTCGCGATTG TAGCTGTTGT ACTGGTGCTT GCCTTTACCC GCGAAAGTAC CGCAGATGAT
ACTCCCAAGA TGGACTGGGC TGGCGTCTTT TCTCTTGGTA TTGCCTTTTT GGCAACCTAC
CTTGCCATCA ATGAAATTCA AAAGCTTGCA GCCATGAGTG TTCCGCTGGT TGTGGGCTTT
ATCGTAGTGG CTGTGATCGC GTTTATTGCG TTCTGGAATC TTGAGAAACG CAACCCAGCT
CCCATGGTAT CGACCATCTA CATGAAGCAA CGTCGTACCT GGGGTTTACT CTTGACGACC
TTACTTACCA TGACCGGTGT GTTCGCTGTG ATGAACGGTG TTGTCCCGGC AATCGCACAA
GACACCACCT TATGGAGCGG CATGGGCGCT GATGTCGTGT CGTTTGCCAC CTTGACCCCC
TATGCGCTGC TTGGCCTGGT GTTTGGACCG ATTACTGGCA TGCTCGCGAG CAAGTTCGGC
TACCATGCAG TGCTGCGCTG CGGCTTGGTG GTAAGCATCG CGGGCATTCT GTTTGGTGTC
TTTATTGCTC AGAGCCCAAG CATTCCCCTA TTGGTAGCCA TTTCAGTTGT TCTTGGTATC
AGCTATGCCG GTACCGCAAA TATCATGCTC AACGGCTTGG GAATTATGCT TTCACCGAAG
GACAATCCCG GTTATTTACC TGGTATGAAC GCTGGCGCAT TTAACTTAGG TGCAGGACTG
AGCTTTGTTG TTCTGTATGC CGTAATGGGT GCCGTTAATA TCGGGGGCGA TGTGGCAGCC
GGCTATGCTT CGTCCCTTAT CACCGGTGCC GTTATTTTAG TGTTTGCCCT GCTTGCTTCG
TTTTTGATCC CGCGTCCAGA AGACGCCGAT CGCAGCTAG
|
|---|
| Protein sequence | MSQVNTPIQS GNAPRIVVLM TSLLVAIFAF QLNASMLSPA LVTMQNELAT TEAAIGLTQT
VFFTAAALFS LFLPRLADLI GRRKVLGSML ALTGVGCLIS AIAPDVNILM IGRVLQGVSG
PVVPMCLIML HEEVTDTARY TRLMAILTSV NGGIAGVDAI LGGWLAGNFG FRSVFLAMAL
VAIVAVVLVL AFTRESTADD TPKMDWAGVF SLGIAFLATY LAINEIQKLA AMSVPLVVGF
IVVAVIAFIA FWNLEKRNPA PMVSTIYMKQ RRTWGLLLTT LLTMTGVFAV MNGVVPAIAQ
DTTLWSGMGA DVVSFATLTP YALLGLVFGP ITGMLASKFG YHAVLRCGLV VSIAGILFGV
FIAQSPSIPL LVAISVVLGI SYAGTANIML NGLGIMLSPK DNPGYLPGMN AGAFNLGAGL
SFVVLYAVMG AVNIGGDVAA GYASSLITGA VILVFALLAS FLIPRPEDAD RS
|
|---|
| |