Gene Ccur_04380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_04380 
Symbol 
ID8374646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp513954 
End bp514490 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID644993362 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_003150843 
Protein GI256826884 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones113 
Fosmid unclonability p-value0.96235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTTA AAGGTACGGC GCATACATTT GGACGCGATA TCGATACCGA TGTCATCATT 
CCAGCGCGCT ACCTCAACAA TCCCAATCCA CAAGAGCTTG CAAAGCACGC GATGGAGGAT
GCCGACCCAA CGTTCGTAGA TACCGTGCAA TCGGGCGATA TTCTGGTTGC GCAAGAAAAC
TTTGGGTGCG GTTCATCTCG TGAGCATGCA CCGGTTGCCC TGAAGGCTGC CGGCATCGAT
TGTGTAGTGG CCAAGAGCTT TGCACGTATC TTTTATCGCA ATAGTATTAA CACGGGTTTA
GCTATTATGG AATGCCCAGA GGCTGCAGAA GTTATTAAAG AGGGCGATGT TGTTTCCATT
GATGCTGATA CCGGTTTGAT TGTTGACGAG ACTACCAAAA AGCACTTTAT GGCTCAGCCA
TTTCCGACAT TTATTAGGGA TATTATTGAA GATGGCGGAT TGGTAGAACA CACGAAGCGC
GAACTCACGC ACACGAACAA TGTTGCCGGC GGCCAGCGCA ATTGCGGTGG AGAATAA
 
Protein sequence
MRFKGTAHTF GRDIDTDVII PARYLNNPNP QELAKHAMED ADPTFVDTVQ SGDILVAQEN 
FGCGSSREHA PVALKAAGID CVVAKSFARI FYRNSINTGL AIMECPEAAE VIKEGDVVSI
DADTGLIVDE TTKKHFMAQP FPTFIRDIIE DGGLVEHTKR ELTHTNNVAG GQRNCGGE