Gene Ccur_04080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_04080 
Symbol 
ID8374616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp480521 
End bp481471 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content51% 
IMG OID644993332 
ProductABC-type spermidine/putrescine transport system, ATPase component 
Protein accessionYP_003150813 
Protein GI256826854 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones112 
Fosmid unclonability p-value0.716043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCA TGGAATTTAA AAACATTACT GCTGGCTATG GCGGTCATAC GGTGCTCGAT 
AATTTTTCGC TTGCTATTGA TAAAGGCGAA CTGATCTGCC TCATTGGCCC GTCGGGCTGC
GGTAAGACAA CGGCACTCCG TTTAGCAGGC GGTTATCTGC AGCCAAAGCA GGGACAGGTG
TTTATTGATG GCGTGGATGT GACGTCGCGT CCACCCGAAC GACGCCCCGT ATCGACCGTG
TTTCAGTCGT ATGCCCTCTT TCCTCATATG ACCGTAGCGC GCAATGTTGA ATATGGCCTT
CGCTTCCAAG GCTTTGCTGC TCATGAGCGC CACGATAGGG CGCTTGAGAT GCTTCAAGCA
ATGCATATGG ACGATCGTGC CGATGCCTAT CCAGCTGAAT TATCGGGTGG GCAGCAGCAA
CGCGTGGCAC TTGCTCGATC GCTTGTCTTG AAACCGCAAG TACTTTTGCT TGACGAACCG
CTTTCGAATC TTGATGAAGG CTTGCGTTTT GAAATGCGCG AAGAAATTAA AGCAGTGCAA
CGAGAATTCG GTGTGGCCAT GCTACTGGTT ACGCACGATC GTGAAGAAGC GATGGCGTTA
GGCGATCGCA TTGCTTTGGT GCATGATGGC CATATTGCGC AAGAGGGAAA CCCGGCACAC
GTGTATGATC ATCCATCCAA TGAGTACTGT GCACGTTTCT TGGGATGGGT GAATGTACTT
AATTCTTGTG ATTCACCTCG CTATTTTCGA GTTGAAGCGG TACGCTTGGG TGCGGAGGGG
GCGTATACGG GTTCGGTGGA GCGCGCAATA TTTTTGGGAT CGTCGTGGGA ATACTTTATC
GACGTCGATG GTCAAAAGGT TCGCGCGCGT GGCGACCGTT CGATGCTCCT GAACGAAGGA
GATGCGGTAT CGTTTAATAT CACGTCTCTG TTGAATTGGA AGGAAGAGTA A
 
Protein sequence
MSVMEFKNIT AGYGGHTVLD NFSLAIDKGE LICLIGPSGC GKTTALRLAG GYLQPKQGQV 
FIDGVDVTSR PPERRPVSTV FQSYALFPHM TVARNVEYGL RFQGFAAHER HDRALEMLQA
MHMDDRADAY PAELSGGQQQ RVALARSLVL KPQVLLLDEP LSNLDEGLRF EMREEIKAVQ
REFGVAMLLV THDREEAMAL GDRIALVHDG HIAQEGNPAH VYDHPSNEYC ARFLGWVNVL
NSCDSPRYFR VEAVRLGAEG AYTGSVERAI FLGSSWEYFI DVDGQKVRAR GDRSMLLNEG
DAVSFNITSL LNWKEE