| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_03820 |
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| Symbol | |
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| ID | 8374590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cryptobacterium curtum DSM 15641 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013170 |
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| Strand | + |
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| Start bp | 443382 |
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| End bp | 447773 |
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| Gene Length | 4392 bp |
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| Protein Length | 1463 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644993306 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_003150788 |
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| Protein GI | 256826829 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 0.164314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGT ACGATGTAAA TAACTTCGAC GCGCTGCGCA TCTCTCTGGC GAGTGCGGAA
GATATTCGCA GTTGGTCCCA TGGCGAAGTC AAGAAGCCGG AGACCATTAA TTACCGTACG
CTCAAGCCCG AAAAGGATGG CTTGTTCTGC GAACGCATCT TCGGTCCTAC AAAGGACTGG
GAATGCGCCT GCGGTAAGTA CAAGCGCATT CGCTTCAAGG GCATCGTGTG CGAGCGCTGC
GGTGTTGAAG TCACCAGGGC GAAGGTTCGC CGCGAGCGCA TGGGTCACAT TGAACTGGCT
GCTCCGGTGA GTCACATCTG GTATTTCAAG GGCAGCCCAA GCCGTTTGGG GTACCTGCTT
GATATTGCGC CAAAAGACCT TGAAAAGGTT CTCTACTTTG CAAGCGCTAT TGTCACGTCG
GTGGACAAAG AAGCGCGTGA AGAAGACGAA GCTGATCTGC GGGATGAATT AGCTGCTGAC
CTTGATGAAC TCGATGCTGA ACGCGATCGC CTGATTGCTT CAACCAGGCG TCTGTCGACC
GATTACACGC CTGAAGACGA CGAGTTTGTC GACGATATCG AAGACGAAGA GCGTCTGACC
CCTGAAGAAG TTGAAGACGA ACTAGCTGAT ATCTATGAGG AATTCAACGA GCGCAAGGCG
CTGCGTAGTG AAGCGTTCGA AGCCTTCATG AAAATTGAAC CCAAGCAGCT GGTTGCCGAT
GAAACCCTCT ATCGCGAAAT GCGCCTGAAC TACAGCGAGT ATTTCAAGGG TGGCATGGGT
GCTGAAGCAG TACGCGATCT GCTGGATGAC ATCGATCTTG ACGAGGTAGC CGAGGAACTT
TCCGAAATTA TTGCAACGGG CAAGGGTCAA AAGCGCGCCA AAGCTGTTAA GCGTCTTAAA
GTGGTTGACG CGTTCCTGAA GAGCGAAAAT AAACCACACG ACATGATTCT TGACGTGATT
CCGGTTATTC CACCCGACCT GCGTCCAATG GTACAGCTCG ATGGTGGTCG TTTTGCAACA
AGTGACTTAA ACGATTTGTA TCGTCGCGTT ATTAACCGCA ATAACCGCTT GCAGCGTCTG
CTCGATCTGG GTGCGCCGGA GATTATTGTC AACAATGAAA AGCGCATGCT GCAAGAAGCT
GTCGACAGTC TCTTTGACAA TGGCCGCCGT GGCCGTCCAG TAACGGGTCC GGGAAACCGT
GCGCTGAAGT CGCTTGCCGA TATGCTCAAA GGAAAGCAGG GGCGCTTCCG CCAGAACTTG
CTGGGTAAGC GTGTCGACTA TTCAGGTCGT TCAGTTATCG TGGTTGGTCC AGAACTGAAA
CTGCATCAGT GCGGTCTGCC GAGTGCGATG GCGCTTGAGC TGTTCAAGCC ATTCGTTATG
AAGCGCCTGG TTGAACTCGA ATATGCCGCT AATATCAAGG CTGCTAAACG AGCTGTTGAC
CGTGGGGCAA GCTACGTGTG GGACGTGCTT GAAGAGGTTA TTACCGAACA TCCCGTCCTG
CTTAACCGTG CTCCAACCCT GCACCGTCTT GGCATTCAGG CATTTGAGCC TGTGCTGACA
AACGGTAAGG CCATCAAGCT GCACCCGCTT GTTTGTACGG CATTTAACGC CGACTTTGAC
GGCGACCAGA TGGCAGTGCA TGTACCGCTG TCCAGTGCCG CTCAGGCTGA AGCGCGCGTG
CTGATGTTGT CCTCTAACAA CATTAAGTCG CCAGCACATG GCCGTCCGCT AACTATTCCG
ACTCAGGACA TGATCATCGG TCTGTACTAC CTGACGACGA TTCGTGACGG GTTTGCCGGC
GAAGGACGTG TCTTTGCGAG CTTCGACGAT GTGCAGCATG CCTATGATGC ACATGCTGAT
CTCGACTTGC AGGCACGTAT TTCTGTGCGT CTGCCGCGCG ACATGACGGT TGTTTCTTCT
TATGGTCAGG CCAAGGAATG CAAAGCGGGC GAGCGTATCG AGACGAGTGC TGGGCGCGTT
ATTATCAACG ATGTGTTGCC CGATGACTAT CCGTTCCTTA ACTACGAACT CGACAAGACC
GAGGTCGGAC GCCTGATCAG TGATTGCTCG AACCGTTATT CGACAGCTGC CATGGAGCCT
ATCTTGGACG GTCTCAAGAG CAACGGTTTC CACTACGCTA CAAAGGCAGG TCTCACGGTG
TCTATTTACG ACGCCACAAT TCCTGATGAT AAGGATGAAA TCCTCGCTGC GGCCGATGAA
AAAGTAGCTG CGATTGATGG CGACTACGAA ATGGGCTTGA TGAGTGACGA AGAGCGCCAT
AAGCAGGTTG TCGACATTTG GACGGATGCA ACTGAAGAAG TGGGCGAGGC TATGGCTTCT
CACTTCAGCG GTCAGAACCC CATCTACATG ATGGCTACCT CGGGCGCCCG CGGTAATATC
AAGCAGATTC GTCAGCTGGC CGGTATGCGT GGTCTGATGG CTGACACGAA GGGTGAGATC
ATCGACACGC CGATTAAGGC AAACTTCCGT GAAGGTATGT CGGTACTCGA ATACTTCCTA
TCTTCGCATG GTGCTCGTAA GGGTTTGGCT GACACGGCAC TGCGTACTGC TGACTCGGGT
TATCTGACCC GTCGTTTGGT GGATGTTTCG CAGGATGTTA TCGTGCGTGA ACTCGACTGC
GGTACCACCG AAGGCGTGAC GTATGCGCTG GTCGACAGCA AGGGCGAACT CGATGAAAAT
CTGGTTGGTC GGTGCCTGTC TGAAGATGTT TCTGATGCGT CTGGTACACG CTTAGCTTCC
GCGGGTGACT ACATCAACAG TATGGATGAA CTCACTGCAT GGCAGCAGGC AGGCGTTGAG
GAAGTTACCA TCCGCACCAT CATGACCTGC CATGCCGAGC ACGGCGTGTG CCAAAAGTGC
TATGGCTGGG ATCTTGCAAC GGCTCGTCCG GTAAATATCG GTACAGCCGT GGGTATTATT
GCTGCTCAGT CTATTGGCGA GCCGGGTACA CAGCTGACGA TGCGTACGTT CCACTCAGGC
GGTGTCGCCG GCGACGACAT TACGCAGGGT CTTCCTCGTG TTGTCGAGCT GTTCGAGGCA
CGCAAGCCGA AGGGTCAGGC TGTCTTGGCC GAGATTGCTG GTACTTTGCA GATTTCAGGC
GACAAGCAAA CCAAGACAAT CACTATTCAC GATCAAGAAG GCAACTACCG CGAGTATGTC
ACTTCGGCAC GCGTGCAGAT GATGCCGGGT GTGGTAGATG GTTCAGAAGT TACGGTTGGT
CAGCAGATTA CACGGGGTTC AGTGAACCCG CACGACTTAC TGCGTCTGAC CGACCCGAAC
ACCACGCTGC GCTATATTGT GGGGCAAGTC CAAGATGTGT ACGTCAGCCA AGGCGTCGAC
ATCAACGACA AGCACATCGA AGTTATTGCG CGTCAGATGC TGCGTAAGGT GGCAGTGCTT
GATTCTGGTG ATTCCGATTA TCTGCCGGGT CGTCAGGTCA ATCGCTACGA ATTCGAAGAT
GTTGCCAATC AGCTGGTGCT CGAAGGCAAA CAGCCGCCCG TTGGTCAGCC GTTGTTGCTG
GGCATTACGA AGGCATCGCT GGCAACCGAT TCGTGGATGT CGGCCGCTTC GTTCCAGGAA
ACCACCAAGG TTCTTACCGA TGCAGCCATC GAAAGCAAGA CCGATCAGCT GGTCGGCTTG
AAAGAAAACG TTATTATCGG CAAGCCGATT CCTGCTGGTA CGGGTCTCAA GCGCTATCGC
AACGTGGGTC TTACTTATAA GGGTCACGCC GTGCATGAAA TTACAAGCGA CACGCTGCCT
GATTATGCGC CTGAGGCGCT GCGCAAGGTT GAAGAACTCC TGCCGCAGCC GCAGGATTGG
TCACTCGATG GTGATAGCTA TCTGAACATG GGCGGTAGCT ATTCGAGCTA CTTCAATAGC
CTTTCAGCTG GTCGTAATTC GCAGCTTTCC GATGAGGACG CACGCCTGTA TATCTATGAT
GACCTGGGTG TCTCTCAACG CTGGGCGAAT AAGTTCTCCG AAGCAGGTAT TGAAACCGTG
GGCGACCTTA TTGGGTACTC CGAAGAAGAC CTATTGCGTA TCGAAGGCAT CGGAGCAAAG
GCGATCGAGG AACTCAAAGA GGGCTTAGAA AAGCACGATT TGCTCCATAT TATTGAGGAC
GACCTAAACG CCACGGGCGA CGACATGAGT CAGCTTTTGG ATATGGTGTT CTCGCCCGAT
GATACGATTC TCATTGGTGG TGATGTGCCG GCAACCTTCA ACACGGAAGG CGAAGACATG
CTCGGCGAAG CACTGCCACC GCGCTCGTAT CAGCGCAATC TCGAAGAGCT TGATGCGATT
CTCGGCAATG TGGGCGATTT GAACCTGCAT ATCGATGAGT CTTCGACTGA CGATTCGGAA
AACGAGGAAT AG
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| Protein sequence | MTEYDVNNFD ALRISLASAE DIRSWSHGEV KKPETINYRT LKPEKDGLFC ERIFGPTKDW
ECACGKYKRI RFKGIVCERC GVEVTRAKVR RERMGHIELA APVSHIWYFK GSPSRLGYLL
DIAPKDLEKV LYFASAIVTS VDKEAREEDE ADLRDELAAD LDELDAERDR LIASTRRLST
DYTPEDDEFV DDIEDEERLT PEEVEDELAD IYEEFNERKA LRSEAFEAFM KIEPKQLVAD
ETLYREMRLN YSEYFKGGMG AEAVRDLLDD IDLDEVAEEL SEIIATGKGQ KRAKAVKRLK
VVDAFLKSEN KPHDMILDVI PVIPPDLRPM VQLDGGRFAT SDLNDLYRRV INRNNRLQRL
LDLGAPEIIV NNEKRMLQEA VDSLFDNGRR GRPVTGPGNR ALKSLADMLK GKQGRFRQNL
LGKRVDYSGR SVIVVGPELK LHQCGLPSAM ALELFKPFVM KRLVELEYAA NIKAAKRAVD
RGASYVWDVL EEVITEHPVL LNRAPTLHRL GIQAFEPVLT NGKAIKLHPL VCTAFNADFD
GDQMAVHVPL SSAAQAEARV LMLSSNNIKS PAHGRPLTIP TQDMIIGLYY LTTIRDGFAG
EGRVFASFDD VQHAYDAHAD LDLQARISVR LPRDMTVVSS YGQAKECKAG ERIETSAGRV
IINDVLPDDY PFLNYELDKT EVGRLISDCS NRYSTAAMEP ILDGLKSNGF HYATKAGLTV
SIYDATIPDD KDEILAAADE KVAAIDGDYE MGLMSDEERH KQVVDIWTDA TEEVGEAMAS
HFSGQNPIYM MATSGARGNI KQIRQLAGMR GLMADTKGEI IDTPIKANFR EGMSVLEYFL
SSHGARKGLA DTALRTADSG YLTRRLVDVS QDVIVRELDC GTTEGVTYAL VDSKGELDEN
LVGRCLSEDV SDASGTRLAS AGDYINSMDE LTAWQQAGVE EVTIRTIMTC HAEHGVCQKC
YGWDLATARP VNIGTAVGII AAQSIGEPGT QLTMRTFHSG GVAGDDITQG LPRVVELFEA
RKPKGQAVLA EIAGTLQISG DKQTKTITIH DQEGNYREYV TSARVQMMPG VVDGSEVTVG
QQITRGSVNP HDLLRLTDPN TTLRYIVGQV QDVYVSQGVD INDKHIEVIA RQMLRKVAVL
DSGDSDYLPG RQVNRYEFED VANQLVLEGK QPPVGQPLLL GITKASLATD SWMSAASFQE
TTKVLTDAAI ESKTDQLVGL KENVIIGKPI PAGTGLKRYR NVGLTYKGHA VHEITSDTLP
DYAPEALRKV EELLPQPQDW SLDGDSYLNM GGSYSSYFNS LSAGRNSQLS DEDARLYIYD
DLGVSQRWAN KFSEAGIETV GDLIGYSEED LLRIEGIGAK AIEELKEGLE KHDLLHIIED
DLNATGDDMS QLLDMVFSPD DTILIGGDVP ATFNTEGEDM LGEALPPRSY QRNLEELDAI
LGNVGDLNLH IDESSTDDSE NEE
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