Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_03800 |
Symbol | |
ID | 8374588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 438977 |
End bp | 439516 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644993304 |
Product | predicted RNA-binding protein containing a PIN domain protein |
Protein accession | YP_003150786 |
Protein GI | 256826827 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000618341 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 0.163612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTC GCAACAAGCT TTTGATTGTT GACGGCTACA ACGTTTTGCG TAGTGGTAGT CGCTATCGAC ATATGCGCGC TATGGCCGAT TACACCGACG AGGTGTACAA CAAATGTCGC GAGGCTCTTA TCAACGACGT AATCGCACAC ATGGGGCGCG ATTACTGCGA GGCATACTTG GTATTCGATG GCAGGGACAA CGAATTTTCA ACAGGGGTGC CCGAACGCAT TGGCGGCGTG CAGGTGGTGT TTTCTCCAGC GGGGTTATCA GCTGATACGG TTATTGAAAA GCTGGCGTTT GATGCTCGTT CACGTGGGGT TGAAGTGATG GTAGTTACGA GTGACGCGAC TATTCAGGAC ACAGTTTTTG GTCTTGGTGT CGATCGTATG AGTGCCGACG GATTCAGTCG CGAAGCAGAA TTGCTCGATC AGGAAGCACG GCTGGACGAA AATCCGAAGG CCACCGTAAA GAATACGGTA GGCGAACGCA TTGATGCGAG CACGCTTGCT CAGTTGGAAG CCTTGCGTGA CGGGAAATAG
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Protein sequence | MKSRNKLLIV DGYNVLRSGS RYRHMRAMAD YTDEVYNKCR EALINDVIAH MGRDYCEAYL VFDGRDNEFS TGVPERIGGV QVVFSPAGLS ADTVIEKLAF DARSRGVEVM VVTSDATIQD TVFGLGVDRM SADGFSREAE LLDQEARLDE NPKATVKNTV GERIDASTLA QLEALRDGK
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