Gene Ccur_03800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_03800 
Symbol 
ID8374588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp438977 
End bp439516 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content51% 
IMG OID644993304 
Productpredicted RNA-binding protein containing a PIN domain protein 
Protein accessionYP_003150786 
Protein GI256826827 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000618341 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones102 
Fosmid unclonability p-value0.163612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTC GCAACAAGCT TTTGATTGTT GACGGCTACA ACGTTTTGCG TAGTGGTAGT 
CGCTATCGAC ATATGCGCGC TATGGCCGAT TACACCGACG AGGTGTACAA CAAATGTCGC
GAGGCTCTTA TCAACGACGT AATCGCACAC ATGGGGCGCG ATTACTGCGA GGCATACTTG
GTATTCGATG GCAGGGACAA CGAATTTTCA ACAGGGGTGC CCGAACGCAT TGGCGGCGTG
CAGGTGGTGT TTTCTCCAGC GGGGTTATCA GCTGATACGG TTATTGAAAA GCTGGCGTTT
GATGCTCGTT CACGTGGGGT TGAAGTGATG GTAGTTACGA GTGACGCGAC TATTCAGGAC
ACAGTTTTTG GTCTTGGTGT CGATCGTATG AGTGCCGACG GATTCAGTCG CGAAGCAGAA
TTGCTCGATC AGGAAGCACG GCTGGACGAA AATCCGAAGG CCACCGTAAA GAATACGGTA
GGCGAACGCA TTGATGCGAG CACGCTTGCT CAGTTGGAAG CCTTGCGTGA CGGGAAATAG
 
Protein sequence
MKSRNKLLIV DGYNVLRSGS RYRHMRAMAD YTDEVYNKCR EALINDVIAH MGRDYCEAYL 
VFDGRDNEFS TGVPERIGGV QVVFSPAGLS ADTVIEKLAF DARSRGVEVM VVTSDATIQD
TVFGLGVDRM SADGFSREAE LLDQEARLDE NPKATVKNTV GERIDASTLA QLEALRDGK