| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_02320 |
|---|
| Symbol | |
|---|
| ID | 8374440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 280287 |
|---|
| End bp | 282773 |
|---|
| Gene Length | 2487 bp |
|---|
| Protein Length | 828 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644993155 |
|---|
| Product | collagenase-like protease |
|---|
| Protein accession | YP_003150645 |
|---|
| Protein GI | 256826686 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.265597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 118 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATG CTGTCGAGTT GCTTGCTCCA GCAGGCAACA TGACGTGTCT GCACGCGGCC
GTGCGCAGCG GGGCAGATGC TGTCTATTTG GGTATCGATC GGTTTAATGC ACGGCGTGGT
GCTGATAATT TCACCATGGA CACACTTGCC GAAGCATGTG ACTATGCTCA TTTACGTGGC
GTACGCGTGT ATCTGACAGC CAATACTGTC ATTCTTCCGT CGGAAGCATC AGCAGCTTTA
GAAATGGTGC GGCAGGCGTA CCGCCGTGGG GTTGATGCCT TTATCGTGCA GGATATTGGA
CTCGCTTTAG AAATACATCG AACACTTCCG CAGGCCGAAC TGCATATTTC AACGCAGATG
AACATCCATA ATGCAGCGGG CATTGAAGCG GTGCACAAGC TTGGTGCTGC TCGTGTGACG
CTTGCGCGTG AATTAGAGCT TGCTGAGATT GATCATCTTT CTCAGGTTGC GCATTCGTTT
GGCATGGAAG TAGAAGTATT TGCCCACGGT GCACTGTGTA TCTGCTATTC GGGACAATGC
CTTATGTCGT CGCTTGTTGG AGGGCGTTCG GCAAATCGCG GTATGTGTGC GCAGGCCTGT
CGCTTGCCAT ACGAACTGCA TAATCGCGCT CAGCGCAAGC CGCTTTCGTC GCCGGGCGAA
CATCTTCTTT CCCCTAAGGA TCTTTGCACG ATCGATCTTT TACCTGAACT GGTAACCTGC
GGCGTTACTT CCTTGAAGAT CGAGGGACGC ATGAAGTCGC CCGAATATGT GTCTGCTGTG
GTGGGTGTTT ATCGTGCTGT ACTCGATCGT ACGCTTGCCT GGTGCGCCCA ACGGGCTGCA
TCAAGTTCCA CCACGGAGCT TTTCAGTGCG TCCATTCCGC AAGAAGTACG CGCCACAGCG
AATGAGCAGC GTATTCTTTC GGAAGCATTC AGCCGAGGAT TTACCACAGC CTATTTAACG
CATGACGACG GCAACGACAT GATGAGCTTC GGCCGGCCAA ATAACCGGGG AATATTTATC
GGTCGAGTAA GCAGCGCACA CGATGGTGCC GTGGTTGTGG AAGCTGAGCG AAAGCTGTTC
GTTGGAGACG TTGTTGAATT CTGGACAAAT CGCGGCCATT TCGCTCAACC AATCAATAGG
CTTGAACCTG TTGGCAAACA AGGCGTGCGC CTTGAAGTGT CCCGTAAGGT GGGAAAAGGT
GACCGCGTGT TTCGTGTGCG CAGCGCGCAA GCTGCCTTTG CTGATGACGC ACTGTTGCCA
AAAGTTCCAC TTGATATTCA GGTAACAGTA CACGAAGGCC AGCCGCTTTC TGTGTCGTTA
CAGTCCGCTT CAGGGGTGCG CGTACAAGCA CAAGGTGCCG TAGTAGAACA GGCACGTACG
AAAGCACTCG TCGCAGACGA AGTTATCGAG CATGTTGATC GCATGGGCAA CGAGCCATTT
GTTCTGCAAA GTATCGAAGT TGATCTCGGT GAAAATGTGG GTGTGGGCTT CTCGCAGATT
CACAAGGTGC GCGCTACAGC GTGCGAAATG ATGCAAGAAG CGCTGCTTGC TCCGTATCAC
GCACGAAAAC TGACACGCAT TACCGATCGA TCACAGTCCT CAAAATCGCT GGTCAGTGGA
AATACCTGCG AGGTTGTTGT ATGGGTCACG AATGCGTCGT GTGCCCGTGC GGCGCACAAA
GCGCATGCCG ATGCGATTTT TGTGCCAGCA CTTAATTATC AGCGCGGGGA ATCGCTTATT
GCTGGGCAGC TATCAGAAAC TGTGGCGCAG GCAGGCTATC CCAAGCAGGT AGGTATTGCG
TTGCCTGCTA TCGACCACGA TCCGCTTGAG GGGACGCGGG AAAACCGTTT CGCATTCGAT
CCGTGGCGCT ACGTTAAGCG GGGAAGAACT GTGCTCGTTG ATAACATGGG GCAGCTGGAT
CGCGCTCTTG CCTGCGGTGC CAACGTCGAA ACAGGTCCCC ATATTCCCGT GTTGAACGCT
TGGACAGCTG ATGGCCTTGT GGCTGCTGGC GCACAACGTG TCTGGTTATC ACCCGAGCTT
ACCTTAGGTC AGATTCAGCA GATCGGCGAA GAAACGCAGG CACCGTTAGG TTTGGTGGTT
TCTGGTGCGA CGGAATTGAT GGTTACCGAG CATTGTTTGC TGATGAGCCA GGGGCCGTGC
AACCGCAATT GCACCACCTG CGTGCGGCGT AAGAGTCCGC ATTATTTAAA GGACCGCAAG
GGTTATGAAA TGCCCGTGAT TACCGATTGC TGTGGACGCA GTCATATTTA TAATGCCGTG
CCGCTTGACA TTGTGCATAC CTTACCCGAC CTTATTGCCG CTGGTGTAAC GGCCATAATG
GTTGATGCCA CCCTGCTGAC TGTTGATGAA ACAACCAAGG CAGTTTCTCG TGCTGTTCGC
GCGCGTGATA TCGCTCTGCG TGGGGCAGAT ACGGTTGCCA AGGTGCCCGG CGCGACAACG
GGACATCTAT TCCGTGGTGT TTCTTAA
|
|---|
| Protein sequence | MNNAVELLAP AGNMTCLHAA VRSGADAVYL GIDRFNARRG ADNFTMDTLA EACDYAHLRG
VRVYLTANTV ILPSEASAAL EMVRQAYRRG VDAFIVQDIG LALEIHRTLP QAELHISTQM
NIHNAAGIEA VHKLGAARVT LARELELAEI DHLSQVAHSF GMEVEVFAHG ALCICYSGQC
LMSSLVGGRS ANRGMCAQAC RLPYELHNRA QRKPLSSPGE HLLSPKDLCT IDLLPELVTC
GVTSLKIEGR MKSPEYVSAV VGVYRAVLDR TLAWCAQRAA SSSTTELFSA SIPQEVRATA
NEQRILSEAF SRGFTTAYLT HDDGNDMMSF GRPNNRGIFI GRVSSAHDGA VVVEAERKLF
VGDVVEFWTN RGHFAQPINR LEPVGKQGVR LEVSRKVGKG DRVFRVRSAQ AAFADDALLP
KVPLDIQVTV HEGQPLSVSL QSASGVRVQA QGAVVEQART KALVADEVIE HVDRMGNEPF
VLQSIEVDLG ENVGVGFSQI HKVRATACEM MQEALLAPYH ARKLTRITDR SQSSKSLVSG
NTCEVVVWVT NASCARAAHK AHADAIFVPA LNYQRGESLI AGQLSETVAQ AGYPKQVGIA
LPAIDHDPLE GTRENRFAFD PWRYVKRGRT VLVDNMGQLD RALACGANVE TGPHIPVLNA
WTADGLVAAG AQRVWLSPEL TLGQIQQIGE ETQAPLGLVV SGATELMVTE HCLLMSQGPC
NRNCTTCVRR KSPHYLKDRK GYEMPVITDC CGRSHIYNAV PLDIVHTLPD LIAAGVTAIM
VDATLLTVDE TTKAVSRAVR ARDIALRGAD TVAKVPGATT GHLFRGVS
|
|---|
| |