Gene Ccur_01840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_01840 
Symbol 
ID8374392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp224251 
End bp225435 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content54% 
IMG OID644993107 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_003150597 
Protein GI256826638 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value0.016992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAAAT CAGCGCCGAA GCACGCTCAG GTAGCTGAAG CACTGGATCC AACGGTTGAT 
GCAGCTGAAG CAGACGCACT CGCTGCAACG AAGGACGATC TGTATCAATT TGCACACATG
TTCCAGCGCG ACCACCAACG TATCCCGCGT GTACTCGTGG GGCTTTCGGG CGGTGTCGAT
TCATCGGTGT GTGCTGCTCT GTTGGTAGAA ACAGGCTGGG ATGTCTGTGG CGCCTACATG
AAGAACTGGA CCATGGATGT TCCGGGCATG CGCTGCCCCT GGGCCGACGA TCTGGCTGAT
GCAAAACGTG TGGCAGTGCG GCTTGGTATT GACTTTCGGG TGTACGACTT TCAAGAAGCG
TATAAGCGGG AGGTCGTCGA TTATCTGGTG GACGAATACC GAGCTGGGCG TACGCCGAAC
CCTGATGTTA TGTGCAATCA GCAGGTGAAG TTTGGACTGT TTTTTGACGC GGCGCAAGAT
GACGGGTTTG ATTACATAGC AACAGGGCAT TATGCCCGCG CATCACATGA TCCTGTCCGT
TTGTTGCGTG CTGCTGACAC GCACAAAGAC CAGACGTATT TCCTGTATCG GATGTCATCC
GATGCCGTGG CGCATACTAT TTTTCCACTG GGAGGATTGC TGAAGACGCA GGTACGCGCT
GCCGCAGAAC AACGAAATCT CTCAACAGCA CATAAGGCCG ATTCACAAGG CATTTGCTTT
GTGGGTGAAG CAGGTATTTG CGATTTTTTG AGCTTGTATG TACACCCGCA GCCGGGGCCT
ATTATCGATG ATGATACTGG TGAAACAGTC GGTTATCACG ACGGGGCTAT CTTTTTCACC
ATTGGCCAGC GTCATGGGTT GGGCATCGGT GGCGGCAGGC GCTATCGTGT TGTACGTAAA
GACATGGATC ACAACATTCT CTATGTGCAT GATGGGCCGC TTGCACCTGT TCAAGACAGC
CTGCTTGAGC TCGATCGTGT GCGATGGATA GCGGATGTGC CACCGCAGGA GGGGGCCTGC
GAAGTGCGCA CCCATCATGG AGAAAAGCTT CTTGCTGCCA CGCTTTTGGC AACTGCTACA
ACGGCCACAG TGCAGCTTGA AGCAGATCAC GATGCGGTGG CTTCTGGTCA GTCGGTTGTT
ATCTATCGTG GCCAGGAATG CCTTGGCGGC GGGATCGTAC GCTAA
 
Protein sequence
MSKSAPKHAQ VAEALDPTVD AAEADALAAT KDDLYQFAHM FQRDHQRIPR VLVGLSGGVD 
SSVCAALLVE TGWDVCGAYM KNWTMDVPGM RCPWADDLAD AKRVAVRLGI DFRVYDFQEA
YKREVVDYLV DEYRAGRTPN PDVMCNQQVK FGLFFDAAQD DGFDYIATGH YARASHDPVR
LLRAADTHKD QTYFLYRMSS DAVAHTIFPL GGLLKTQVRA AAEQRNLSTA HKADSQGICF
VGEAGICDFL SLYVHPQPGP IIDDDTGETV GYHDGAIFFT IGQRHGLGIG GGRRYRVVRK
DMDHNILYVH DGPLAPVQDS LLELDRVRWI ADVPPQEGAC EVRTHHGEKL LAATLLATAT
TATVQLEADH DAVASGQSVV IYRGQECLGG GIVR