Gene Ccur_01820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_01820 
Symbol 
ID8374390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp222392 
End bp222844 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content51% 
IMG OID644993105 
Productrrf2 family protein, putative transcriptional regulator 
Protein accessionYP_003150595 
Protein GI256826636 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value0.00272492 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATTT CAACAAAAGG TCGCTACGCA CTGCGTTTTC TTCTTGACCT CTGCCAGCAC 
CAAGGCACCG GCCCCGTGCC CCTTAAAGAT ATTGCACAGC GGCAAGGGAT ATCAAAGAAA
TACCTCGAGC AAGTGATTGC CTTGCTCAAT CCCACTGGCA TACTGCAGGT CACCCGCGGT
TACCAAGGGG GCTATCGTCT TGCAAAAGCG CCGCGCGATA TTACCGTAGC TGATGTGCTT
GCCGTAACTG AAAGCGGGTT TACTGCAGGC GCCGCCTCAA CCGGCACGAA CGTCGATACT
ACCGAACGGT CTGCATCCTT ACTCTCTTCA AATGAAACGA TGCTTGAACC CATCTGGGAA
GGGCTTGAAC AAACCGTCAA TGATTATCTT GCAGAAATAT CCCTGCAAGA CATCATCGAT
CGCTATACCC CCACCATCGA ATACTTTATC TAG
 
Protein sequence
MQISTKGRYA LRFLLDLCQH QGTGPVPLKD IAQRQGISKK YLEQVIALLN PTGILQVTRG 
YQGGYRLAKA PRDITVADVL AVTESGFTAG AASTGTNVDT TERSASLLSS NETMLEPIWE
GLEQTVNDYL AEISLQDIID RYTPTIEYFI