| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_01350 |
|---|
| Symbol | |
|---|
| ID | 8374343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 168323 |
|---|
| End bp | 169294 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644993059 |
|---|
| Product | conserved protein of unknown function BmrU |
|---|
| Protein accession | YP_003150550 |
|---|
| Protein GI | 256826591 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.956318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 136 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCGT CAGTTACAGG CGAGAAAGTT TTGCTTATAG CTAACCCTTC TGCACAGAGC
GGGAAGGGCG CTATTGCCGC AAACTTCGCT GCCGATGTGC TTGAGCGGAG TTTAGCTGAG
TCTGCTGTGG GCAGTTACCT CGCTGGGGCG CAGCTCGAGG TTCAGTTTAC TAAATCAGCG
GGGGACGCTT ACCATTTCGC CTTTGCTGCT GGTGGTTATC GTGCGGTAGT AGCGCTTGGC
GGTGATGGAG TTATCCATGA TGCGGTCAAT GGACTGATGC ATCTAGAGGC GTTCGACCGT
CCTGCATTTG GGGTGATTCC TTCTGGCACG GGTAATGATT ATGCTCGCGC ACTTGGGGTG
CCGCTGGGTA CAGCTGAAGC GGTGCAGGTG CTCTTGCAGG CGCGTGCGCC CCGTGCGGTT
GACGTGGGCA GTTGTAATGG TGTCTACTTT GCTGAAACAC TTTCGTTTGG GTTGGATGCG
GCCATTGCAC TCGATACGAT GGAGCGGCGT GCACGCACCG GGCAGACAGG TGCGAAAGTA
TTCGTTGCAA GTGGTATCGA TCAGGTGCTG AATCATCTGC GTGCCTATAA ATACACCGGT
ACGTTTGACG ACCAATCTGT GCAGGGACAA TCGATTACCT TTGCGGTGCA GGTGGGTCCT
TATTACGGCG GTGGGTTCCG TATTTGCCCT GATGCGCAGA TTGATGACGG ATACTTTGAT
ATCTGCATAG CCCATCCACC AGTTGGTCCG ACGCGCGCTC TTTATATTTT TCTGCGCGCC
AAAAACGCCC ATCATACAAA GTTTCGCCAG ATTGAATTGC GGAGAGCAAA AAGTTTATCG
CTGCACTTCG ACGAGCAGCC CTGCGTGCAA ATCGATGGTG AACCGCTGGT AGCCGATTCA
TACGAAGTGC GTATACATCC ACATGAACTG CAGGTTTTAG CACCCCCTAT GCGTGGTAGT
ACGTCGCGCT AA
|
|---|
| Protein sequence | MSASVTGEKV LLIANPSAQS GKGAIAANFA ADVLERSLAE SAVGSYLAGA QLEVQFTKSA
GDAYHFAFAA GGYRAVVALG GDGVIHDAVN GLMHLEAFDR PAFGVIPSGT GNDYARALGV
PLGTAEAVQV LLQARAPRAV DVGSCNGVYF AETLSFGLDA AIALDTMERR ARTGQTGAKV
FVASGIDQVL NHLRAYKYTG TFDDQSVQGQ SITFAVQVGP YYGGGFRICP DAQIDDGYFD
ICIAHPPVGP TRALYIFLRA KNAHHTKFRQ IELRRAKSLS LHFDEQPCVQ IDGEPLVADS
YEVRIHPHEL QVLAPPMRGS TSR
|
|---|
| |