| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_01200 |
|---|
| Symbol | |
|---|
| ID | 8374328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 151485 |
|---|
| End bp | 152597 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644993044 |
|---|
| Product | hydrogenase expression/formation protein HypD |
|---|
| Protein accession | YP_003150535 |
|---|
| Protein GI | 256826576 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0409] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 156 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTA ATTTGCCTGA CAACATTCTT GCCCGCGATC TATCCCGCTT TAAAGATCCC
GATCTTGCAC GGGGTTTGAT TGCGTCGATA GAAGAATTGG CGCCTGTGTC CTGCAATTTA
ATGGAGGTCT GTGGAACCCA TACCGTTGCG ATTGCACGAA ACGGTATTCG TGCGATTATG
CCTGAAGGTA CCCGATTGCT TTCTGGACCG GGCTGCCCCG TGTGCGTAAC CGCCAACAAA
GATATCGACA CTGTTATTGC ACTTACACGT ATTCCCGAAG TTACCGTGGC TACGTTTGGC
GATATGACGC GCGTGCCAGG ATCTACTTCA AGCCTGCTTG CTGAAAAAGC GGCGGGACGA
TCGGTTGAGA TCGTCTATTC GCCGCTTGAT GCTCTTACCT TTGCTCAGGA GCATCCAGAG
CGGCAAGTGG TGTTCGTTGG GGTTGGGTTT GAAACAACAA CACCACTCGT ATCTATGGCC
ATTAAACGAG CACATGTGCT GAATCTATCC AATTTCACCG TGTTTGTGGC ACATAAAAAT
ATGCCGGGAG CGCTTGAGAC AATTGTGGCT GACCCGTCAC TGAAGGTTGA TGCGCTTATT
TTGCCTGGCC ATGTAAGCAC GGTGACAGGT ATTAGGTGTT ACGAATTCCT TGCTCATGAT
TATGGTGTGC CGGGTGTGGT CACGGGGTTT GAACCAGTTG ACGTACTGCA AGGTATTGCC
ATGCTTATGC GGCAGTTGCG CGAAGGGCGC GCTGAAATTG AGATCGCCTA TACACGCGGT
GTGCGTCCTG AAGGAAACCA AGTTGCGCTT GCCGCTATCG ACGAAGTGTT CGAAACATGT
ACGGCTACCT GGCGTGGATT AGGTCCTATT CCAGACAGTG GATATGCGAT TCGCGAAAAG
TACCGAGCCT TTGATGCAGT TGCGCGGTTT CAGCCTGTTG TAGAAAAAAC AGTTGAACAT
GCGGGGTGTC GCTGCGGAGA CATTCTGCGT GGAGCACAGT CACCTGATGA ATGCCCACTG
TTTGGAAAAG TATGCACGCC GGAAAATCCT ATCGGTCCCT GCATGGTATC GAGCGAGGGT
AGTTGCGCTG CCTATTATCG ATACTATCGG TAA
|
|---|
| Protein sequence | MARNLPDNIL ARDLSRFKDP DLARGLIASI EELAPVSCNL MEVCGTHTVA IARNGIRAIM
PEGTRLLSGP GCPVCVTANK DIDTVIALTR IPEVTVATFG DMTRVPGSTS SLLAEKAAGR
SVEIVYSPLD ALTFAQEHPE RQVVFVGVGF ETTTPLVSMA IKRAHVLNLS NFTVFVAHKN
MPGALETIVA DPSLKVDALI LPGHVSTVTG IRCYEFLAHD YGVPGVVTGF EPVDVLQGIA
MLMRQLREGR AEIEIAYTRG VRPEGNQVAL AAIDEVFETC TATWRGLGPI PDSGYAIREK
YRAFDAVARF QPVVEKTVEH AGCRCGDILR GAQSPDECPL FGKVCTPENP IGPCMVSSEG
SCAAYYRYYR
|
|---|
| |