Gene Ccur_00870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_00870 
Symbol 
ID8374295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp110277 
End bp111023 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID644993011 
Productputative effector of murein hydrolase LrgA 
Protein accessionYP_003150502 
Protein GI256826543 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones148 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAG AAGCTCGTAC CTCCAAGGGT ACGACAGGCG AAGCTGTCTT GTGCGACTCT 
GCTGCCACTG GACTTATCGC AGGTGAGGCT ACCGTAAGCA GCTCTGTATC GGACGAATCA
GCCTCGGGCA AAACTCTTCT ACGTGACTCC ATCTCAAGTG AATCGACCTC AAGCGAAACC
GTCTCGAGCG ACTCTACATT GAATAAAGCC GTCCCAGGTG AGAACGCATG CGACACACAT
AAATCCGATA ACGAACGTGA AACGAGTAAA ACACGCAAGC GCAAACGTTT AAAACGTCGC
ACAAAGGTAC GGCTAGGACG TGCGATACTT CTGACCCTGC AGATCGCATT GCTTATTATT
GTCTACGAAA TTGGCTGCAC TGTTGCAACA TTTCTTCCCA TCGATCTGCC AGGAAATATC
GTCGGCATGG GACTTTTACT TATTTTGCTG GCCACCGGTA TTCTCAAACA CAAGCATGTT
GGCCGCGCTT GCGATTACCT GATTGACAAC ATGTCTATCT TTTTTATTCC GGCAGGTGTC
GGCATTATGG GATGCTTCAC TCTACTTGCT GGCAATGGGC TTAAGTTTGC CTTTGTCTGC
ATAACTACCA CTGTTATCGT TTTTCTTGCA ACAAGCTGGA CGGTTATTGC AGCACAGCGC
CTTGTTGAAT CATATGCCCA CAAAAAGACG ATACGCACTC AGTCCGATAA AACGAAACAA
TCTTGTTCTC ATAGACTAAC GCACTAA
 
Protein sequence
MLKEARTSKG TTGEAVLCDS AATGLIAGEA TVSSSVSDES ASGKTLLRDS ISSESTSSET 
VSSDSTLNKA VPGENACDTH KSDNERETSK TRKRKRLKRR TKVRLGRAIL LTLQIALLII
VYEIGCTVAT FLPIDLPGNI VGMGLLLILL ATGILKHKHV GRACDYLIDN MSIFFIPAGV
GIMGCFTLLA GNGLKFAFVC ITTTVIVFLA TSWTVIAAQR LVESYAHKKT IRTQSDKTKQ
SCSHRLTH