Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_00400 |
Symbol | |
ID | 8374248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 54298 |
End bp | 55869 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644992964 |
Product | amino acid carrier protein |
Protein accession | YP_003150455 |
Protein GI | 256826496 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.149456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 0.00282795 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACATGA AGTTTCTCGT TGATCTGTCT GGGCAGATTG ATACGTTTAT GTATACCTAC ATTCTTATTA TCATGCTGGT TGCATCTGGT GTGCTGTTTA CCATTCGCAC TAAAGGCGTG CAAATTCGCC TGTTTAAGGA CATGATTAAG TCTATTACCG AACAGAAATA TAACGAAGGT GAAAAGACTA CCTCATCGTT TCAGGCATTG ATGATATCCA CGGCCAGCCG GGTTGGTACG GGCAATATTG CCGGCGTTTC GACAGCCATT GCTTTTGGCG GCCCTGGTGC ACTGTTTTGG ATGTGGATTA TGGCCACTGT GGGTTCGGCT TCAGCGTTTA TCGAATCGAC GTTGGCTCAA ATATTCAAGG TAAAGAATGA GGACGGTTCG TTTCGTGGTG GTCCGGCATA CTATATTCAG CAGGGGATTG GCAAACGGTG GCTTGGAGTG GTTTTTGCCC TGGCACTTAT TGTCTGCTTC GCCTATGGTT TTAATGCACT ACAGGCCTAT AATGCCTCAT CAACACTGGA AGTCTATATG CCAGACTATT TCAAAAGTGA CGTTGTGGTT GCCGTTGCAT TGTTCTTAGC GGCATTTACT GCTATCTGCA TCTTTGGTGG CGGGAGCCGT ATTAGTTTCT TTACGAGCAT TATTGTGCCG GTTATGGCGT TTAGCTATTT AGCTATCGCA CTCGTTATTA CCTTCATGCA TATCTCTGCT GTGCCGGCTG TATTCGGGCT GATTTTTTCG TCGGCTTTTG ATTTTCGATC ATTTGCAGGT GGGTTTGCCG GGTCGGTTGT CTCGTGGGGT ATTAAACGCG GTCTTTATTC GAATGAAGCC GGTATGGGCT CTTCACCAAA TGCCGCTGCT GCTGCTTCGG TTTCTCATCC TGTTAAACAG GGGCTTGTGC AGACACTCTC AGTATTCATT GACACGATGA TCATCTGTAC CTGCACCGGT ATGATGGTGC TCGTGTTTTA TGTGGGTAGC AACTTGGAAA CTATGGTCGA TCCGATAACA AATGTTACCT CGTTTGTAAA TCCGCAGACG GGTGCCATTC TTACCGGTAT GCCTCTTATC CAAGAGGCTT TGCGCTATTC GTTGGGCGAT TTCGGTGTGA ACTTCGTTAC GTTTAGCATT TTCTTATTTG CTTTTTCGAG CTTGCTTGGC AATTACTACT ATGCCGAAAG CAACATGCGG TTTATCAAAG ATAACCGCAT TGTCGTGTTC ATTTTCCGTA TTACCTGCAT TATTGCAGTA TTTTGGGGCG CACAGGCAGG ATTTGACCTA GTGTGGAACT TTGCTGATAT CGCGATGGGC TTTCAAGCGT TCGTCAATCT GGTTGCCCTT TTCTTACTGG GAGGATGGGC TGTTAAAGCG TTGCGCGACT ACGAAAGCCA ATCGCAGAAA GGGGAAAACC CTGTCTTTTT GGCTGCGTCT ATTCCAGGCT TGCCCAAAAC GGAATGCTGG CATGAAACAG CCGAGGAACT TGCAGCTGAT GCAGCGCGTG GTACGCTTGC AGCCGATGCA AAAATGAAGC ATCAGGTTGT TGAACTGCTG AACGATAAGT AG
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Protein sequence | MDMKFLVDLS GQIDTFMYTY ILIIMLVASG VLFTIRTKGV QIRLFKDMIK SITEQKYNEG EKTTSSFQAL MISTASRVGT GNIAGVSTAI AFGGPGALFW MWIMATVGSA SAFIESTLAQ IFKVKNEDGS FRGGPAYYIQ QGIGKRWLGV VFALALIVCF AYGFNALQAY NASSTLEVYM PDYFKSDVVV AVALFLAAFT AICIFGGGSR ISFFTSIIVP VMAFSYLAIA LVITFMHISA VPAVFGLIFS SAFDFRSFAG GFAGSVVSWG IKRGLYSNEA GMGSSPNAAA AASVSHPVKQ GLVQTLSVFI DTMIICTCTG MMVLVFYVGS NLETMVDPIT NVTSFVNPQT GAILTGMPLI QEALRYSLGD FGVNFVTFSI FLFAFSSLLG NYYYAESNMR FIKDNRIVVF IFRITCIIAV FWGAQAGFDL VWNFADIAMG FQAFVNLVAL FLLGGWAVKA LRDYESQSQK GENPVFLAAS IPGLPKTECW HETAEELAAD AARGTLAADA KMKHQVVELL NDK
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