Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_00210 |
Symbol | |
ID | 8374229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 25897 |
End bp | 27735 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644992945 |
Product | putative glutamate synthase (NADPH) small subunit |
Protein accession | YP_003150436 |
Protein GI | 256826477 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 0.301732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTAT TGTCTTTTGG ACCCTACGCA CACGCTGACG CTGCTAATGG CCGTGTCGCT GAAGCATTCC AACGGCGCGT GCAAACTACG CCGCCGGGAA TGTGTCCGAT TGCGTTGCAA CTTTCGTTTT TGCAAGCCTG TGGTGCACAG ACATGTGGGA AGTGCGTTCC CTGTCGCGAT GGTATTCCCC AGCTTGCACG CTTGCTTGAT CAGGTGGTTA CCTGTCATGC AACCACTGAG ACGCTTATAC AAATTCGTGC GCTGGCGCAG TCCATTCGCG ACACGAGTGA TTGCGCGATT GGGTATCAGG CCGGTCAAGG AGTGCTTGAT GGGCTCGAAG AGTTTGCTGA CGAATATGAA AGTCATCTGT CGCAGCGCAG TTGTTTGTCC GACATTGGGC AGACGGTACC GTGCGAAACA GGGTGCCCAG CGCACGTTAA TGTTCCGTCG TATTTGGCAC TTGCGGGCAA GGGCGATTAT GCCGGTTGCA TCAACATGGT GCGCAAGGAT AATCCGTTTC CCACCGCATG CGGTTACGTG TGCGAGCACC CTTGTGAAGA GCGCTGTCGT CGCACGATTA TCGATGCACC GCTTAATATT CGCGGCATCA AGAAGTTTGC GTGCGATCAG CTTCCTGCTG ACGAAGTTCC CCTGCCGCAG CCGAATGTGG GAACAGGTCG TCGCATTGCG GTAGTAGGTG CCGGTCCATC TGGTATGACC TGCGCATACT TTGCAGCTCT TATGGGTCAT TCAGTTACCT TAATTGAAGC GCGCCGTCAG CTTGGCGGCA TGATGCGCTA TGGCATTCCG GCTTATCGTT TCCCGCGTGA AAAGCTCGAT CAAGATATTC GCGCCATTCT TTCGCTGGAC AATATAGAGG TACACACCGA AGAGACGGTG GGTACCGAAG AAATGCGTCG CTTGGCCAAA GAATACGATG CTGTCTATGT AGCCATTGGC GCTCAGCAGG GGAAGACGCT TGATCTTGCT GGCGCTGATG CGAAGGGTGT TATGTCAGCG GTCGACTTGC TTACTCGTAT TGGCGATGAC GACTACCCCG ATTTCACCGG TAAGAATGTC GTGGTTATCG GTGGCGGTAA CGTTGCTATG GACTGCGCGC GTACCGCAGT GCGCGCCGGC GCAAAAACGG TAACGGTAGC GTATCGCCGT CGGCTAGAAG ATATGACAGC CCTGCGTGCA GAAGTAGATT CCGCCATGCA GGAAGGCGTT GAAATGATGA CGCTGCAGGC GCCTGATTCC ATTGAAGTGG TCGACGGGCA CTGTGCTGCA TTAATCACGC AGCCCCAGCG TATTGGCGCC GTTAAACGGG GAAGACCTGC TCCGGTTACC GCCGATAAGC CGCAGGTAAA AATCCCTGCT GACATTATTC TTATTGCTGT GGGGCAAGCG ATTGAAAGCG CTCCGTTTGA AGAGGCTGGT ATGCAGGCCG ACCGAACGTA TTTTGTGGCC GATAAGCAGC TGCATGCCGC GGCAAGTGCG CCGAATGTCT TTGTGGGCGG TGACTGTCAG GTTGGTCCCA AAACAGTAAT TATGGCAATC GCCGCTGGCA AGGTGGCGGC GCGCAACATT GATGCCTTCC TTGGGTATGA CCACAAGCTC GATTGTGGTG TTGCTGACCC GGCGCCTGAT GCGAATATTC GTGAGGCGTA TGGACGTGTG AATATTGCTG AGCGGTCCGC TCGCGAGCGC AAAGGTGACT TTTTAGCAAC TGAAGTTGAA ATGACCGTTG AAGAAGCACA GCAGGAGTGT GCTCGCTGTT TGCGCTGTGA TCACTTTGGC TGCGGTGCGA TGGTAGGAGG GAGGATCCAG TATGCCTAG
|
Protein sequence | MAVLSFGPYA HADAANGRVA EAFQRRVQTT PPGMCPIALQ LSFLQACGAQ TCGKCVPCRD GIPQLARLLD QVVTCHATTE TLIQIRALAQ SIRDTSDCAI GYQAGQGVLD GLEEFADEYE SHLSQRSCLS DIGQTVPCET GCPAHVNVPS YLALAGKGDY AGCINMVRKD NPFPTACGYV CEHPCEERCR RTIIDAPLNI RGIKKFACDQ LPADEVPLPQ PNVGTGRRIA VVGAGPSGMT CAYFAALMGH SVTLIEARRQ LGGMMRYGIP AYRFPREKLD QDIRAILSLD NIEVHTEETV GTEEMRRLAK EYDAVYVAIG AQQGKTLDLA GADAKGVMSA VDLLTRIGDD DYPDFTGKNV VVIGGGNVAM DCARTAVRAG AKTVTVAYRR RLEDMTALRA EVDSAMQEGV EMMTLQAPDS IEVVDGHCAA LITQPQRIGA VKRGRPAPVT ADKPQVKIPA DIILIAVGQA IESAPFEEAG MQADRTYFVA DKQLHAAASA PNVFVGGDCQ VGPKTVIMAI AAGKVAARNI DAFLGYDHKL DCGVADPAPD ANIREAYGRV NIAERSARER KGDFLATEVE MTVEEAQQEC ARCLRCDHFG CGAMVGGRIQ YA
|
| |