Gene Ccur_00100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_00100 
Symbol 
ID8374218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp10384 
End bp12198 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content49% 
IMG OID644992933 
ProductGTP-binding protein TypA/BipA 
Protein accessionYP_003150427 
Protein GI256826468 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000172571 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones126 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGG AGCATATTCG TAACGTCGCT ATTATTGCCC ATGTTGACCA TGGCAAAACT 
ACGCTGGTTG ATCGACTGCT CTACGCAGGA AATGTATTTC GTGAAAACCA GCAGGTGGAA
GAACGCGTGC TTGATAGTAA CGATCAAGAG CGCGAGCGTG GCATTACGAT TCTTTCGAAG
AATATTTCCA TCCACTACAA GGACACAAAG ATCAATATTA TTGACACTCC GGGTCACGCC
GATTTCGGCG GTGAAGTTGA ACGCGTTCTC AACATGGCTG ACGGCGCACT GTTAATTGTT
GATGCCTTTG AAGGTCCTAT GCCACAAACG CGTTTTGTAC TGCGACATGC TCTTGATTTG
GGGCTGCGGA TTCTTGTAGT CATTAATAAA ATCGACCGTC CTGGCGCACG GCCCGATGAA
GTACTTGATG AAGTATTTGA TCTGATGGTT GAACTGGATG CGAACGACGA ACAGCTCGAT
TTCCCGGTGA TTTATGCAAG TGCTGTCAAT GGGTATGCTC GCTTCGAGCC GAACGATGGC
AACATGGATA TGGTACCCTT GCTCGATACC ATTCTGAAAG AAATCCCTGC ACCGGATTGC
GAACCCGCGG GTCCTGTCGC GCTGCAAATT TGTACGGTTG ATCACTCAAG CTTTGTTGGC
CGTATTGGGG TTGGTCGACT CTTCAGCGGA ACTCTCCATA AGAACGACCA GGTCTTGGTT
ATCAAGCGTA GCGGTACGCG CTATAACACG GGCATTAAAC AGGTGTTCAC GTTTGATAAT
TTGGGAAAGA AAGAAGAAGA CGAAGTCCAT GCGGGTGACA TCGTTGCAGT GGTTGGTGTA
GAAGATGCTG ATATTGGTGA CATGGTTACC AGCATCGATC AACCGATCGA GCTTGACCCG
ATTAAGATTG ACGAGCCGAC CATGGCTGTT GTATTCCAGG CATCGGATAG CCCTCTTGTT
GGCAGCGACG GCGACATTGT GGGTGCCCGT CAGCTGAACG AACGCCTAAT GAAAGAAGCT
GAAGGTAACG TAACCATGCG CATTACCGAG CTTGAAGATA AAACGGGCAT TGAAGTGGCC
GGCCGTGGCA TCTTACAAAT ATCGGTTCTT ATTGAAACGA TGCGTCGTGA AGGGTTTGAA
CTGCAGGTTG GTCGCCCCCG CGTCATTATG AAAAAGGACG CCAACGGCAA GACACTTGAG
CCTATTGAAG AAGCAACTGT TGAAGTGCCA AGCGAATATG CTGGCAAGTG CATTGAAGTG
TTTGGTAATG CAGGCGGCGA AATGACCGAC ATGGCTTCGA AGGGCGATCA AACACATCTT
GTGTTTAAGA TTCCCAGCCG TGGGACAATG GGGTTGCGTA CCAAATTGCT GAATGCTTCA
CGTGGCGAGG CAAATATGTT CCACCGCTTC AGTGAATATG GCCCGTATCG CGGTGAATAT
GCTGGTCGCA AGAATGGTTC GATGATCAGT ATGACCACGG AAAAAAGTGT GGCATACGCG
CTTGATACCC TGCAACAGCG GGGAACGCTG TTCATTGGGC CCGGTGAAGA TTGCTACGAA
GGTATGATCG TCGGGGAGTC TGCCAAAGAG GGCGATATGG TGGTGAATAT CGCGAAGAGC
AAGAACCTGG GCAACCAGCG TTCAAGCGGT GCCGATAAAG CCATTCAGCT GACCCCGCCA
ACCACCTTCA CGTTGGAAGA AGCGCTTGAA TACATTCAAG AGGATGAATT AGTTGAAGTA
ACTCCCAAGA ACATCCGCCT GCGTAAACGT ATTCTTGATA CGGTTGCTCG CAAGAAAGCG
AATAAGAATA GGTAG
 
Protein sequence
MKQEHIRNVA IIAHVDHGKT TLVDRLLYAG NVFRENQQVE ERVLDSNDQE RERGITILSK 
NISIHYKDTK INIIDTPGHA DFGGEVERVL NMADGALLIV DAFEGPMPQT RFVLRHALDL
GLRILVVINK IDRPGARPDE VLDEVFDLMV ELDANDEQLD FPVIYASAVN GYARFEPNDG
NMDMVPLLDT ILKEIPAPDC EPAGPVALQI CTVDHSSFVG RIGVGRLFSG TLHKNDQVLV
IKRSGTRYNT GIKQVFTFDN LGKKEEDEVH AGDIVAVVGV EDADIGDMVT SIDQPIELDP
IKIDEPTMAV VFQASDSPLV GSDGDIVGAR QLNERLMKEA EGNVTMRITE LEDKTGIEVA
GRGILQISVL IETMRREGFE LQVGRPRVIM KKDANGKTLE PIEEATVEVP SEYAGKCIEV
FGNAGGEMTD MASKGDQTHL VFKIPSRGTM GLRTKLLNAS RGEANMFHRF SEYGPYRGEY
AGRKNGSMIS MTTEKSVAYA LDTLQQRGTL FIGPGEDCYE GMIVGESAKE GDMVVNIAKS
KNLGNQRSSG ADKAIQLTPP TTFTLEEALE YIQEDELVEV TPKNIRLRKR ILDTVARKKA
NKNR