Gene Ksed_27000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_27000 
Symbol 
ID8374203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2782397 
End bp2782906 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content75% 
IMG OID644992919 
Productpredicted RNA-binding protein 
Protein accessionYP_003150415 
Protein GI256826455 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG ACGGACCGCG CCCGGAGCGC ACCCGCGAGG AGCTCGAGAA CGAGGGCGAG 
CTCGCCGCCG ACTACCTCGA GACCCTGCTG GACATCGCCG ACCTGGACGG GGACCTCGAG
GTCCAGCTCG AGGGCGACCG CGCGCTGGTC AGCATCGTGG ACTCCGAGGA GGGCACGGTG
CCCCGTCGGC TGGTGGGCCC CAACGCGCAG GTCCTGGAGG CCCTCCAGGA GCTCGCGCGC
CTGGCGGTGC AGGCCGAGAC CGGGGAGCGC ACCCGGTTGA TGCTGGACGT CGCCGGCTAC
CGCGCGGAGC GCCGCGCCGC CCTCGAGGAG CTGGCCGATC GCACGGCGGC CGCGGTGTGC
GAGAGCGGCA CCGAGCGCGC GCTGGAGCCG ATGACCGCCT TCGAGCGCAA GGTCGTCCAC
GACCGCGTCC TGGCCGCGGG CCTGGTGTCG AGCTCGGCCG GCGAGGAGCC GAACCGCTAC
GTCGTGGTGT CGCCGGCCAC CGCGGAGTGA
 
Protein sequence
MSHDGPRPER TREELENEGE LAADYLETLL DIADLDGDLE VQLEGDRALV SIVDSEEGTV 
PRRLVGPNAQ VLEALQELAR LAVQAETGER TRLMLDVAGY RAERRAALEE LADRTAAAVC
ESGTERALEP MTAFERKVVH DRVLAAGLVS SSAGEEPNRY VVVSPATAE