Gene Ksed_26920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26920 
Symbol 
ID8374195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2773297 
End bp2774979 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content71% 
IMG OID644992911 
Productintegral membrane protein MviN 
Protein accessionYP_003150407 
Protein GI256826447 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCAGT CCTCCGTGGG CCGCAACGCC GCCATCATGG CGGCGGGCAC CCTCACCTCC 
CGCGTGCTCG GTCTGGTGCG CGTCGCCCTG CTGACCGCCG CCCTGGGTGC CGCCACCAAC
GTCGGCAACG CGTTCGACAC GGCCAACCAG CTGCCCAACG TGTTGTTCAT CATCATCGCC
GGCGGCGTGC TCAACGCGGT GCTCGTGCCG CAGCTGACCA AGGCGATGCG GCACGCCGAC
GGCGGGCAGG ACTTCACCGA CCGGCTGCTG ACCCTCGCCC TGGTGATCAT GGCCGGCCTG
ACGGTGGTGG CCATCATCGG CGCCCCCCTG CTGGTGGCCC TGTACGGCTC GGGCTACACC
CCGGAGACCG CGCGGCTCTC GGTCTTCTTC ACCATGCTCT GCCTGCCGCA GATCTTCTTC
TACGGGCTGT ACACGCTGCT GGGGCAGGTC CTCACCAGCC GGGAGTCGTT CGCCCCGTAC
ATGTGGACCC CGGTGCTGGC CAACGTGGTG CAGATCGCCG GCATCGTGGC CTACCTGTTC
GTATACCCCC ACGAGCCGCG GGTGGCGGAC GTCACCTGGT CCATGATCCT GCTGCTGGGC
GGCAGCGCGA CCCTCGGCAT CGTCATCCAG GCGCTCGCGC TGGTGCCCTT CCTGCGGAAG
GTGGGCTTCA CCTACCGGCC CCGATGGGGT TTCCGCGGGG TGGGGTTGCG CAGCGCCTCC
ACGGTGGCGA TGTGGTCGCT GGCCACCATC GTCGTCGCCC AGCTGGGCAT CATGGCCAAC
AAGACGGTGC TCTCCCACGC CCCGCACGGC GTGGCCGGCC AGGCGGCCTA CAGCAGCGCG
TTCCTGATCT TCATGCTGCC GCACAGCCTG GTGACCGTCA GCCTGCTCAC GGCCATGTAC
CCGGCGATGT CACGCCGCAT CCACGACCGC GACATGGCGG CCATCGGGCA GGACCTGCGC
CGGGGGCTGC GCAGCACGAC CGCGGCGGTC ATGCCCCTGG CCGCGCTGCT GATGGTGGTG
GGCCCCGTGG TGGCGGCGCT GATGTTCCCC TCGCAGACGC CCAACACGGT GCGCGCCATC
GGGCTGGCCG TGGCGGTGCT CGCGGTGGGG CTGGTGCCCT ACGCGGCGAT CGCCCTGTTC
CAGCGGGCCT ACTACGCGTT CGAGGAGGGC TACAAGCCCT TCATCATCCA GATCCTGTCC
ACGGTCCTCA TCGGGGCGAT GGCGTGGTGG GCCCTGGGCC TCCCGGCGGA ACGGGTGCTG
ATCGGCATCG CCCTGGCCCA GACGCTCTCG CAGTTCGGTG GGGCGGCGTT CTCCACGCTG
CTGATCCGCC GCCGCGTGCC CGAGGCGGGG CTCGGCCGGC TGGTGGGCTT CTACACGCGC
CTCTCGGTGG CCAGCCTCAC CGCGGCAGCG GCCGCCTGGG CCTCGATGCA GTGGCTCGCC
CGGCGGACCG GGGCCGAGGC CCTGGAGTTC TCGACCGCCC TGGGCAACCA GTGCGGCGGC
CAGGGAGAGG TCGCCTGCCG CGAGCTCCCG CGGGTGGCCG ACCAGTGGCT GGCCGTGGCC
TTCACCGGCG TACAGACCGG TTTCGTCTTC GTGGGTGTCT TCGCGCTGCT GGCGGCCCTG
CTGAACATCC ACGAAGTGAC CGGGGTCGTC CAGCAGGTGC TGCGGCGGGT AAAGCGGGCC
TGA
 
Protein sequence
MSQSSVGRNA AIMAAGTLTS RVLGLVRVAL LTAALGAATN VGNAFDTANQ LPNVLFIIIA 
GGVLNAVLVP QLTKAMRHAD GGQDFTDRLL TLALVIMAGL TVVAIIGAPL LVALYGSGYT
PETARLSVFF TMLCLPQIFF YGLYTLLGQV LTSRESFAPY MWTPVLANVV QIAGIVAYLF
VYPHEPRVAD VTWSMILLLG GSATLGIVIQ ALALVPFLRK VGFTYRPRWG FRGVGLRSAS
TVAMWSLATI VVAQLGIMAN KTVLSHAPHG VAGQAAYSSA FLIFMLPHSL VTVSLLTAMY
PAMSRRIHDR DMAAIGQDLR RGLRSTTAAV MPLAALLMVV GPVVAALMFP SQTPNTVRAI
GLAVAVLAVG LVPYAAIALF QRAYYAFEEG YKPFIIQILS TVLIGAMAWW ALGLPAERVL
IGIALAQTLS QFGGAAFSTL LIRRRVPEAG LGRLVGFYTR LSVASLTAAA AAWASMQWLA
RRTGAEALEF STALGNQCGG QGEVACRELP RVADQWLAVA FTGVQTGFVF VGVFALLAAL
LNIHEVTGVV QQVLRRVKRA