Gene Ksed_26730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26730 
Symbol 
ID8374176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2745446 
End bp2748661 
Gene Length3216 bp 
Protein Length1071 aa 
Translation table11 
GC content76% 
IMG OID644992892 
Productglycosyl transferase 
Protein accessionYP_003150388 
Protein GI256826428 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.899531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG AGCCGCTCCC GGTCGCAGCC ACCCCCGGTC CCCCCGTCGA CCTGGCCGAC 
ACCCCCCTCA CGACGGATGC GCGGGTTGCG GCCGACCACG CCCGCCACGC CGCCCGCCAG
CCCAGCCGTC TGGTGGCCAC CCTCCTGCGC ACCAAGTCCG TGGCCGGTCG CGCCGTTCTG
GCCGTGCTGG CCGGGGGGCC CGACACGACC GCGCAGCAGC TGGAGGACCT GGGCCGCCGG
GTCGATGCGG GGGAGCTCAG CGCAGCAGAG GCCGTCAGTG GTCTGGCGGC ACCCGACGCC
CGCCTGCTCT GCGAGTACGC GCGGGTCGCC GCCCTGCAGC TCTCGGACCC CGCGGGCATC
TCCGCGGGAC TCGGGCTGTA CGCCCTGGCG GACGCCCTGA GTGGCGGCCA GCACCCGCGG
GATGCCCACG CCGACCTCTG GGCCCAGCTG CTGCTGGTGC GCGGCCAGGG CGACGACGCG
CGGCACGCCA CCGCCGTGCT GGACCGCGGG CGGGGAACCG AGCACACCAC GGCCTTCTCC
CACATCGACC TACTGAACCC GCACCGGCCG CAGGCGGGAC CGACCGCCGA CGACCACGCC
TGGTGGGAGG CCTTCTCGGG CCGGCTCGGC GCCGGACTGG GCTCCACCGT CCGCCTGGCC
TCGGTGGACG AGCTCTTCGA CCGGGGGTGG CTGGCACGCC ACGGCCTGGA CGCCGACACC
CTGCTGAGCA CTCCCTTCGA CCGCCTCCTG GGGGAGGGCG GCACCCCGGT GGACCACCCC
TACCGGGTCA GCGTCATCAT GAGCGCCCAC AACCCGGGCC CCAAGGTGCT GCTCGCTGCC
CGTTCGCTGG TCTCGCAGAC CTGGCAGAAC TGGGAGCTCC TCGTGGTCGA CGACGCCTCC
CCGGAGCCCA CCCCGGGCAT CCTGGAGGCC ATCGAGGAGC TCGACCCCCG CATCCAGGTG
ATCCGCAAGG CCGTCAACGG TGGCACCTAC CGCTGCCGCA ACACCGCCAT CCGGCGCGCC
ACCGGTGACG CGATCGTGGT GCTGGACAGC GACGACTGGG CCCACCCCGA GCTGCTCGAG
GCCGGGGTGC GCCCGCTGCT GGACCCCGCG GACCCACTGC ACACCGCGCG CGGGGTGCCG
GAGATCGCGA CGCGCCAGCT GGCCCTGCGG ATCGGTGACG ACCTGCGCAT CACCCGCCCC
GGGTACCGCG GCGCCATCCC CTGCGCGCCG AGCCTGATGG TGCCGATGGT GCCGGGGGTC
GCCCGGGTGG GCTTCTTCGA CCCGGTCCGC AAGGCCGCCG ACACCGAGTA CGCCCGCCGA
CTGGAGGCCG CCACCGGACG CCCGGTCCAC CAGTCGCGGC ACGTGCTGGT GCTCATGCGG
ACCGATGCCT CCTCGCTCTC GGCCGCCGAC TTCTCCCTCG GGTGGCGCCA CTCCGCCCGC
CACGAGTACA AGAACGCCTA CGCGGGGTGG CACGCCCGCA TCGCGGCCGG GGAGGACCCC
TGGCTCGAGC CGGACGGCCC GCCGCAGATC GCCGGCCCGC GCCGGTGGAG CTCCGCCCTG
CGGCCGCCGG GCTCCCCCCG ACCGCACCTC GATGCGGTGT TTGCCGGGGA CTGGCGCCGC
TACGGCGGGC CACAGCGCTC GATGCTGGAG GAGATCCACA GCCTCCTGGA GGCGGGTCTC
GAGGTGGGCG TGATGCACCT GGAGGCGCTG CGCTTCATGC GCGCCACCGA CGACCCGCTG
TGCACCCCGC TGCAGGAGCT GCTGGACGCC GGCCGGGTGC GGATGGTGCA CCTGGACGAC
GCCGTGGACA TCGACGTCCT GCTGCTGCGC TACCCCCCGA TCCTGCAGTA CCCGCCCAGC
GCGCCGAAGG GCCCGGACGG GAGCCCCACC GGGGTGCGTC CGCGCATCCT GGTGGTCGTG
GCCAACCAGG CACCTGCCGA GGTGGACGGC TCCGACCAGC GCTACGCCGT GGGGACCGTG
GAGAGGAACG CCCGGGAGCT GTTCGGCACC GACCCGCTGT GGGCGCCGCA GGGCCCGTCC
ATCCGCCGCC TGCTGCAGCG GGAGACCTCC GCCCTGACGC CCTGGGACGA CCCGGGCCTG
GTGGACCTGG CCACCTGGCG CACCCGGGAC CCGGAGCAGC CGCCCGCGGC GACCCCCGTC
GTGGGCCGCT ACTCCCGCGA CGACCGCATC AAGTTCCCCA CCGAGTGGGA GACCCTCCGC
GCGGCCTACG ACTTCGGCCC CCGGGTGCAC GTGCGGATGA TGGGGGCGCC GATCACCGTC
AAGCGGCTGA AGCAGGAGGC CCGCAAGGCG GGCCTCCCCG TCGAGGCGCC CTCGTCCCCG
TGGGAGCTGC TGAAGCACGG CAGCCAGGGC GTCCAGGACT TCCTGGCCGG GATCGACGTG
TTCGTCTACG TGGACAACCC CCACGCCCAC GAGGCCTTCG GGCGCACCCT GCTGGAGGCC
GCGGCCAGCG GCGTGCCGGT GGTGGCGACC CCGAAGCACC GCGACACCTT CGGCGACCTC
CTGCTGTACG CCGAGCCGCA CGAGGTGCCG CAGGTCGTCC ACGAGCTGCT CACCGTGCCG
GGCCTGTACC GCCAGCGCGT GGAGCACCAG CTGGCCGTGG TGGCCGAGCG CTACTCGCGG
GAGTCCTTCG CCGCCCACGT CGACGAGCTG CGGGACGAGG CCGCCCCGGA GGCGGGAGCC
GGGGCGGGCG TTGACCCCGC CGACGCCGGT GCCCCCCAGG CGCCCCTGTC CCTGACCGTC
CGGACCACCG ACGACCCCCG GCTGCCGCTG GCGGTCGAGC TCGGTGCCGG GGCCGGGGCC
GTCAGCCAGG TCCTGCCGCT GCGGCGGCCG GCCGACGGAG AGCGCGCCGA CGCCCTGGCT
GCCGTCGGCC CCGAGGCCGC CGTGCAGGCC GCACTGACCG CCCACCTGGA CGCCCTCGAT
GCGGGGCACG GCGAGCAGGC GGCCCTCGAG GCGGCACACC GCATCGACGG CCTGCGGGCC
CTGGTGCTGC TGCGTGACGG GGAGATCGCC TGCCTGGTGT CGCAGGGCAC CACCAGCCAC
CCGCAGGGGC GGGAGACCCG GCTGGAGCTC CCCGCCGGGC CGCCGACGAC CGGTCTGGTG
TGGCGCACGG CGCAGCCCGC CCCGGGCCGG GTGACGGTCG CGCCCCGCGC GCAGGCCCAG
CCGGCCGCCC CGCAGTCCGA GGCGGTGCCC TCGTGA
 
Protein sequence
MTAEPLPVAA TPGPPVDLAD TPLTTDARVA ADHARHAARQ PSRLVATLLR TKSVAGRAVL 
AVLAGGPDTT AQQLEDLGRR VDAGELSAAE AVSGLAAPDA RLLCEYARVA ALQLSDPAGI
SAGLGLYALA DALSGGQHPR DAHADLWAQL LLVRGQGDDA RHATAVLDRG RGTEHTTAFS
HIDLLNPHRP QAGPTADDHA WWEAFSGRLG AGLGSTVRLA SVDELFDRGW LARHGLDADT
LLSTPFDRLL GEGGTPVDHP YRVSVIMSAH NPGPKVLLAA RSLVSQTWQN WELLVVDDAS
PEPTPGILEA IEELDPRIQV IRKAVNGGTY RCRNTAIRRA TGDAIVVLDS DDWAHPELLE
AGVRPLLDPA DPLHTARGVP EIATRQLALR IGDDLRITRP GYRGAIPCAP SLMVPMVPGV
ARVGFFDPVR KAADTEYARR LEAATGRPVH QSRHVLVLMR TDASSLSAAD FSLGWRHSAR
HEYKNAYAGW HARIAAGEDP WLEPDGPPQI AGPRRWSSAL RPPGSPRPHL DAVFAGDWRR
YGGPQRSMLE EIHSLLEAGL EVGVMHLEAL RFMRATDDPL CTPLQELLDA GRVRMVHLDD
AVDIDVLLLR YPPILQYPPS APKGPDGSPT GVRPRILVVV ANQAPAEVDG SDQRYAVGTV
ERNARELFGT DPLWAPQGPS IRRLLQRETS ALTPWDDPGL VDLATWRTRD PEQPPAATPV
VGRYSRDDRI KFPTEWETLR AAYDFGPRVH VRMMGAPITV KRLKQEARKA GLPVEAPSSP
WELLKHGSQG VQDFLAGIDV FVYVDNPHAH EAFGRTLLEA AASGVPVVAT PKHRDTFGDL
LLYAEPHEVP QVVHELLTVP GLYRQRVEHQ LAVVAERYSR ESFAAHVDEL RDEAAPEAGA
GAGVDPADAG APQAPLSLTV RTTDDPRLPL AVELGAGAGA VSQVLPLRRP ADGERADALA
AVGPEAAVQA ALTAHLDALD AGHGEQAALE AAHRIDGLRA LVLLRDGEIA CLVSQGTTSH
PQGRETRLEL PAGPPTTGLV WRTAQPAPGR VTVAPRAQAQ PAAPQSEAVP S