Gene Ksed_26400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26400 
Symbol 
ID8374143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2707944 
End bp2709101 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content74% 
IMG OID644992860 
ProductNADH:flavin oxidoreductase 
Protein accessionYP_003150356 
Protein GI256826396 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0915981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC CCGTCGCCCT GTTCGAGCCG CTCACGCTGC GCGATCTGGA GGTCCGCCAC 
CGGGCGTGGG TGGCCGCGAT GTGCCAGTAC TCCTGCGACC CCGTGACCGC GCCCGGCGTG
CCCAACGACT GGCACCTGGT GCACCTGGGT GCCTTCGCCA CCGGCGGAGC CTCGATGATC
GTGACCGAGG CAGCGGCCGT CACCCCCGAG GGCCGAATCT CCCCCCACGA CGCGGGGATC
TGGAACGACG AGCAGGTGGC CGGCTGGCGC CGCGTGAACG ACTTCGTGCA CGGCCTGGGC
ACGGGCGTGA CCACCGCGGT GCAGCTCGCG CACGCCGGGC GCAAGGCCTC CACCTGGCGG
CCGTTCGACA CCGAGGGGCG CACGGGCTCG GTACCGGTGG GGGCCGATGC GGAGGGGCGC
GCTGACAGCG TCGAGACCGC CGGCTGGCAG ACCGTGGCGC CCACCGACGC GCCGTTCGGT
GAGTACGCCG CGCCCCGCGC GCTGACCGAT GCGGAGGTCC GCGCCACCGT GACCGCGTTC
GGCGACGCGG CCGAGCGCGC TGTGGCAGCC GGCTTCGACG CGGTCGAGAT CCACGGTGCC
CACGGGTACC TGGTGCACCA GTTCATCTCG CCGTTGGTGA ACACGCGCAC CGACGCCTGG
GGTGGCTCCG AGGAGGGCCG CCACCGCTTC GGCCTGGAGG TGGTGCGCGA GGTGCGCGCC
CGCGTGCCGG ACTCGATGCC GGTGCTGCTG CGCATCTCCG CGACCGACTG GGAGGACGTC
GAGGGCGACG TGGCCTCGCT GCAGCGGTTC GTGGTGGCCG CGGCGGAACT GGGGGTCGAC
TTCGTGGACG TCTCCAGCGG TGGCAACCTG CCGGCGCCGA AGATCGTTTC CGGGCCGGGC
TACCAGGTGC GCTTCGCGAC CGCCATGCGC GAGGCGTTGC GGGAGGCCGG GTTCGAGGTA
CCGGTGGGGG CGGTGGGTGA GATCAGCTCG CCGCACCAAG CCGAGACGAT CGTCGGGCAG
GAGCAGGCCG ATGCGGTGCT CCTCGCGCGG GCGGCTCTGG CGGACCCGCA CTGGTGGATG
CGCGCCGCAT CGGAGCTGGG GGCGCAGCCG GTGACCATCG GGCAGTACGA GCGGGCCCGG
GTGGACCGGC TGGCCTGA
 
Protein sequence
MPRPVALFEP LTLRDLEVRH RAWVAAMCQY SCDPVTAPGV PNDWHLVHLG AFATGGASMI 
VTEAAAVTPE GRISPHDAGI WNDEQVAGWR RVNDFVHGLG TGVTTAVQLA HAGRKASTWR
PFDTEGRTGS VPVGADAEGR ADSVETAGWQ TVAPTDAPFG EYAAPRALTD AEVRATVTAF
GDAAERAVAA GFDAVEIHGA HGYLVHQFIS PLVNTRTDAW GGSEEGRHRF GLEVVREVRA
RVPDSMPVLL RISATDWEDV EGDVASLQRF VVAAAELGVD FVDVSSGGNL PAPKIVSGPG
YQVRFATAMR EALREAGFEV PVGAVGEISS PHQAETIVGQ EQADAVLLAR AALADPHWWM
RAASELGAQP VTIGQYERAR VDRLA