Gene Ksed_26300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26300 
Symbol 
ID8374133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2698167 
End bp2699048 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content74% 
IMG OID644992850 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003150346 
Protein GI256826386 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.131884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCGGCCCCGC CGCGCCCTCG CGCGCGACGC TCGATGCGGG CCGCCCCCCG 
AGCCGGGCCG GCCGCGCCTA CCTGGTGGTC GGCGGGGTGA TCGTGGCCGT GATGGTGGCG
ATGGCGCTGC TCTCCTACGT GTGGACCCCC TTCGACCCCA CCCGAGTGGT CGCCTCCGAC
CGGCTCCAGG GGCCGAGCGC CGAGCACTGG CTGGGGACCG ACAAGTTCGG GCGCGACACC
TTCAGCCAGG TCCTCGTCGG GGCGCGCACG ACGCTCTACG TGGGCTTCGT GGCCGTGGGC
GTGGCCGCGC TGCTGGGGGT GCCGCTCGGC ATCCTCTCGG CGATGGGGCC GCGCTGGCTC
GACGGGTTGA TCATGCGCGC CGCCGACATC GGCCTGGCCT TCCCCGGTCT GCTGCTGGCC
ATCATGTTCG CCGCGGTCTT CGGGGCCTCG ACCACGTCCG CGATGGTCGC CATCGGCCTG
GCCAGCGTCC CCAGCTTCGC CCGCGTGACC CGTGCCGGGG CGCTGGGCAT CCTGCCGCGG
GAGTTCATCA CCGCCGCCCG CGTGGCTGGG CGGCGCCCCG CATCGATCGG CTGGCGCCAC
GTGCTGCCGA ACGTGGTGGG GCTGGTGATC GTCCAGGCCT CGGTGAGCTT CGCGCTGGCG
ATCCTCGCCG AGGCGGGGCT GAGCTTCCTG GGCTTCGGCA CGCCGCCGCC CACACCCAGC
TGGGGCCGGA TGCTGCAGGA GAGCCAGTCG CTGCTGGCCT CGGACCCGCG CCTGGCGATC
GTGCCCGGGG TGGCGATCGC GCTGGCCGTG CTGGGGTTCA ACCTGCTCGG CGACGGGCTG
CGTGACCGCT TCGACCCGCA GATGCAGGTG GTCGACCAGT GA
 
Protein sequence
MTTTGPAAPS RATLDAGRPP SRAGRAYLVV GGVIVAVMVA MALLSYVWTP FDPTRVVASD 
RLQGPSAEHW LGTDKFGRDT FSQVLVGART TLYVGFVAVG VAALLGVPLG ILSAMGPRWL
DGLIMRAADI GLAFPGLLLA IMFAAVFGAS TTSAMVAIGL ASVPSFARVT RAGALGILPR
EFITAARVAG RRPASIGWRH VLPNVVGLVI VQASVSFALA ILAEAGLSFL GFGTPPPTPS
WGRMLQESQS LLASDPRLAI VPGVAIALAV LGFNLLGDGL RDRFDPQMQV VDQ