Gene Ksed_25600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25600 
Symbol 
ID8374063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2631957 
End bp2633273 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content70% 
IMG OID644992784 
Producttransposase family protein 
Protein accessionYP_003150287 
Protein GI256826327 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG CTACCTTCCA CTGCCCTGAC CTGACCACGT TCTGCCGCCT GGACGAGCTC 
GGCCTCGTCG TGGTCGGGCA GCGCCTGGCG CCCGACCGTG CGGTGCTGGA GTGCCGCGTC
GCGACGCGCG GTGACGACGC GTTCTGCCAC GGGTGCGGAG CCGAGGGCGT CGTGCGTGAC
ACGGTCTCGC GGTCGCTGGC GCACGAGCCC TTCGGATGGC GGCCGACGAC GCTGCTGATC
AGGGTGCGTC GCTACCGCTG CGCGACCTGC CTTCGGGTGT GGCGCCAGGA CACCACGGCC
GCAGCCGAGC CACGGGCGAA GCTCTCACGG GCAGCGGTGC GCTGGGCCTT GGTCGCCCTG
GTGGCCCAGC ATCTGACGGT CGCCAGGATC GCCGAAGCTC TTGACGTGTC GTGGGACACG
GCGAACGACG CCGTCCTGGC CGAAGGTCGC CGGTTGCTGA TCGACGACCC CGCCCGGTTC
GACGGCGCCC GCGTGATCGG CGTCGATGAG CACGTGTGGC GGCACACCCG CCGTGGGGAC
AAGTACGTCA CCGTCATCAT CGACCTGACC CCGATCCGTG ACGGCACCGG ACCGGCCCGT
CTTCTGGACA TGGTCGAAGG CCGGTCCAAG AGCGCGTTCA AGACCTGGCT CGCCGCCCGC
CCGAAGACCT GGCGCGACGG CGTGGAGGTG GTCGCGATGG ACGGGTTCAC CGGCTTCAAG
ACCGCTGCTG CCGAGGAGCT GCCCGACGCG ACCGCAGTGA TGGACCCCTT CCACGTGGTG
AGGTTGGCCG GTGACGCCCT GGACCGCTGC AGGCGCAGGG TCCAGCTCGA TCTGCACGGC
CACCGCGGCC GCGCCAAGGA TCCGCTCTAC CGCGCCCGGC GGACCCTGCA CACCGGCGCC
GACCTGCTCA CCGACAAGCA GAAGACCCGG CTGGAAGCGC TGTTCGCCGC CGACGAACAC
ATCGAGGTCG AAGTGACCTG GGGCATCTAC CAGCGCATGA TCACCGCCTA CCGCCACCCC
GACCGCTCCC AGGGCCGGAC TCTCATGACC GCGGTGATCG ACTCCCTGGC ACGCGGCGTC
CCGGCCGCGC TGAGCGAACT TGTCACGCTT GGACGGACCC TCACCAAGCG CGCCGCGGAC
GTGTTGGCGT TCTTCGACCT GCCCGGCACC AGCAACGGCC CCACCGAGGC CATCAACGGC
CGTCTCGAAC ACCTGCGCGG CTCCGCCCTG GGCTTCCGGA ACCTGACCCA CTACATCGCC
AGGAGCCTCC TCGAAGCCGG CGGCTTCAGA CCACGACTAC ACCCTCAGAT CGGATGA
 
Protein sequence
MSDATFHCPD LTTFCRLDEL GLVVVGQRLA PDRAVLECRV ATRGDDAFCH GCGAEGVVRD 
TVSRSLAHEP FGWRPTTLLI RVRRYRCATC LRVWRQDTTA AAEPRAKLSR AAVRWALVAL
VAQHLTVARI AEALDVSWDT ANDAVLAEGR RLLIDDPARF DGARVIGVDE HVWRHTRRGD
KYVTVIIDLT PIRDGTGPAR LLDMVEGRSK SAFKTWLAAR PKTWRDGVEV VAMDGFTGFK
TAAAEELPDA TAVMDPFHVV RLAGDALDRC RRRVQLDLHG HRGRAKDPLY RARRTLHTGA
DLLTDKQKTR LEALFAADEH IEVEVTWGIY QRMITAYRHP DRSQGRTLMT AVIDSLARGV
PAALSELVTL GRTLTKRAAD VLAFFDLPGT SNGPTEAING RLEHLRGSAL GFRNLTHYIA
RSLLEAGGFR PRLHPQIG