Gene Ksed_25580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25580 
Symbol 
ID8374061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2630065 
End bp2631315 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content77% 
IMG OID644992783 
Productpredicted acyl-CoA transferase/carnitine dehydratase 
Protein accessionYP_003150286 
Protein GI256826326 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones87 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG CTCCGATCCG ATGGTGGGCC GGCCCCCTCG ACGCCGAGGG CCTGGCGTGG 
TCGTCAGTCA CCGCCGCCCG CGACGCCACG GGGGAGCTGT GCCGGGCCCG CGGGCTGACG
GTGGAGGTCG GCACCCGGCC CGCGCTCGTG GCCAGCGCGT TCGCCGCCAT CGAGCACCTG
CGCGTGCACG GGCGGGAGGC CCAGGGGTGG GCACCGCTCT CGGGCTTCTT CCCCACCGCC
GAGGGATGGG TGCGCCTGCA CGGCAACTAC CCGCACCACG CCGCGGCGAT CACCCGGGCC
ACCGGCGCCG GCACCCGTGA GGAGCTCACC GACGCCCTGG CCGAGCGCAC CGCCCTCGAG
GTGGAGGACG ACATCACCGC CGAGCACGGC ATCGCGGTGG CCGTGCGCAC CTCCGAGCAG
TGGCAGGCCC ACCCGCACGG GGCGTCCACG GCCAACGAGC CGTGGGTTCT GCCCGAACCG
GGCGGCGAGC GTGCGCCGCT GTCCCCCGAC CCGGCTGCAC CAATGGCCGG GGTGCGCGTG
CTCGACCTCA CCCGCGTCAT CGCCGGCCCC ACCTGCTCCC AGCTGCTGGC CTGCCTGGGA
GCCGACGTGC TCCGCATCGA CCCGCCGGGG CGCCCCGAGC TGCTGGACCA GCACCTCTCC
AACGGTATGG GCAAGCGCTC GGCGGAGCTC GACCTACCGG CCGACGGCGA GGCGGTGAGG
GCGCTGCTCC CCCGGGCCGA TGTGGTACTC GTGGGCTACC GCCCCGGCTC GATGGCGCGC
TTCGGGCTCG ACCCGGGCAC GCTGGCGGCG GAGCACCCGC ACCTGGTGGT CGCGTCGCTC
TCCGCGTGGG GCGAATCGGG CCCGTGGGCG CAGCGCCCGG GGTTCGACTC CATCGTCCAG
GCGGCCACCG GCATCGCGGT CCGGTGCGGG GACGGCGAGC GCCCGGGCGC GCTGCCGGTG
CAGGCCCTCG ACCACTCCAC CGGCTACGTG ATGGCCGCGG AGGTGCTGCG GCACCTGGCC
CGGGCGCGTG CCGGCATCGT GCGGGTCAGT CTGCTCGGCG CTGCCCGCAC CCTGCTGGCC
GCACCGGCTC CTGCCGACGA GCCCCTCGAG GACCTGCCCG CCGAGCGGGT GGAGGTCGAC
TCACCGCACG GGCACCTGGG GACGACCCCG CCCCCGCTCA CCCTCGACGG CGCGACGATC
GAGCGCCCCG TCAGCGGCTA CGGCGCCGCG ATGCCGGAGT GGGTGGGCTG A
 
Protein sequence
MTRAPIRWWA GPLDAEGLAW SSVTAARDAT GELCRARGLT VEVGTRPALV ASAFAAIEHL 
RVHGREAQGW APLSGFFPTA EGWVRLHGNY PHHAAAITRA TGAGTREELT DALAERTALE
VEDDITAEHG IAVAVRTSEQ WQAHPHGAST ANEPWVLPEP GGERAPLSPD PAAPMAGVRV
LDLTRVIAGP TCSQLLACLG ADVLRIDPPG RPELLDQHLS NGMGKRSAEL DLPADGEAVR
ALLPRADVVL VGYRPGSMAR FGLDPGTLAA EHPHLVVASL SAWGESGPWA QRPGFDSIVQ
AATGIAVRCG DGERPGALPV QALDHSTGYV MAAEVLRHLA RARAGIVRVS LLGAARTLLA
APAPADEPLE DLPAERVEVD SPHGHLGTTP PPLTLDGATI ERPVSGYGAA MPEWVG