Gene Ksed_25290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25290 
Symbol 
ID8374032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2605379 
End bp2606173 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content77% 
IMG OID644992754 
ProductFlp pilus assembly protein TadB 
Protein accessionYP_003150257 
Protein GI256826297 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACGG TGACCGCCGT GGTGGTGGCC TCGCTGCTGG CGGCGGCGCT GCTGCTCTGG 
CCGGCCCGTG CCCGGCACGA GGTGGCGGTG GGCCTGACGG AGCTGCCCCG CCGGCGGGCC
GAGCTCGAAC GCAGGGAGGC CACGACCCGG TCCCTGCGGG GAGCCCTGGC GGCCGACCCC
GTGAGTGCTG CGGGGTCGGG TGTGCGCGGG GTCCTCGCGC TGCTGCGACA GCGCCTCGGG
AGGGTCCGCG TGACCGACGA CGAGGTGCTG CGGCTGCTGG ACGGCCTGGC CGCCGCCCTG
TCCGCGGGTC TCCCGCCGGC TGCGGCCCTG CGGCTGGTGG CCGACTCCGG GCCCGCCGTG
CCCTGGCTCG AGCCGGTGCT CGGGGCCGGG GAGCAGGGCG GCCTGTTGGG CGCGTCGTGG
AAGCAGGTGG CCGCGGGGCA CCAGAGCGTG GCTCTGGAGC AGGTGGCCAG TGCCTGGGCG
CTCTCCGAGC GGTCCGGGGC CGCGCTGGCA CCCGCCGTGG CGATGGCGGC CGAGACCGTG
CGCCGTCAGC GGGAGAGCCG GCAGACCGCC CAGTCGGCCG CCTCGGGCGC CATGGCGTCC
ATGTACATGC TCTCGTTGCT GCCGCTGGTC GGACTGGCCG GCGCCGGAGC GCTGGGGTGG
TCCCCGCAGG AGCTCTACCT TCAGCAGCCG CTGGGCCTGG TGAGCGCGCT GGCCGGGGTG
GCCCTGCTGG TGGTCGGCTG GCTGGCCTCC CGCCGGCTGG TGGCACTGGC CCTGCGCGGG
GAGGTCATCC GATGA
 
Protein sequence
MVTVTAVVVA SLLAAALLLW PARARHEVAV GLTELPRRRA ELERREATTR SLRGALAADP 
VSAAGSGVRG VLALLRQRLG RVRVTDDEVL RLLDGLAAAL SAGLPPAAAL RLVADSGPAV
PWLEPVLGAG EQGGLLGASW KQVAAGHQSV ALEQVASAWA LSERSGAALA PAVAMAAETV
RRQRESRQTA QSAASGAMAS MYMLSLLPLV GLAGAGALGW SPQELYLQQP LGLVSALAGV
ALLVVGWLAS RRLVALALRG EVIR