| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_25220 |
|---|
| Symbol | |
|---|
| ID | 8374025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2599658 |
|---|
| End bp | 2600458 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644992747 |
|---|
| Product | ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| Protein accession | YP_003150250 |
|---|
| Protein GI | 256826290 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 88 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGC CGACGAACCG AGTGGGCGGC CTGTACGGCG GCAACATCCG CGCCGTGGTG
GAGCGTGGGC TGAAGGTGAT GGCCGGGCAG AACTGGCTGG TGATGGTCTC GGGCTTCTTC
GAGCCGGTGC TGTACCTGCT GGCGATGGGC TACGGCCTCG GCGGTCTGGT GGGCGACGTG
GAGGGGCCCG GTGGGCGCAC CGTGGAGTAC GCGGCCTTCA TCGCCCCGGC GCTGTTGGCG
ACCTCGGCCA TGAACGGGGC GGTCTACGAC TCCACCTGGA ACGTGTTCTT CAAGCTGCGC
TTCGCCAAGC TCTACCAGGG CATGCTGCAG ACCTCGCTGG GGCCGCTGGA CGTGGCCGCC
GGGGAGATCG TGCTGGCGCT GATCCGGGGG CTGCTGTACG CGCTGGGGTT CATGGGCGTG
ATGACGGCGA TGGGGCTGGT GACCTCGTGG TGGGCGGTGC TGATGGTGCC GGTGGCGCTG
CTCATCGCGC TGGGTTTCGC GGCACTGGGC ATGGCGGTGA CGAGCTACCT GAAGAGCTTC
CAGCAGATGG ACCTGGTGCA GCTGGTGCTG CTGCCGATGT TCCTGTTCAG CGCCACGCTG
TTCCCGGTGG AGGTGTTTCC CACGCCCATC GAGTGGGTGG TGAAGGCCCT GCCGCTGTGG
CACGGGGTGG AGCTGATGCG GCACCTGGCC TTCGGCGAGC TCACGTGGGC CGTGGCCGGA
CACGCGCTGT ACTTCGTCGC GATGTCTGTG TTCGGCATTT GGTTCGCCGC GGTGCGGCTG
CGGACGCTGT TCCTGCGCTG A
|
|---|
| Protein sequence | MSAPTNRVGG LYGGNIRAVV ERGLKVMAGQ NWLVMVSGFF EPVLYLLAMG YGLGGLVGDV
EGPGGRTVEY AAFIAPALLA TSAMNGAVYD STWNVFFKLR FAKLYQGMLQ TSLGPLDVAA
GEIVLALIRG LLYALGFMGV MTAMGLVTSW WAVLMVPVAL LIALGFAALG MAVTSYLKSF
QQMDLVQLVL LPMFLFSATL FPVEVFPTPI EWVVKALPLW HGVELMRHLA FGELTWAVAG
HALYFVAMSV FGIWFAAVRL RTLFLR
|
|---|
| |