Gene Ksed_25140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25140 
Symbol 
ID8374017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2592250 
End bp2593818 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content75% 
IMG OID644992739 
Productmethyltransferase family protein 
Protein accessionYP_003150242 
Protein GI256826282 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones81 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CCGCGCAGAC CCCCGTCCCG CATCGCCACC CCTCGCCGCC GGCCCCGCGC 
CGGGTGACTG ATGACGGCGA GGACCTGACG CCCCTCATCG AGTCCCTGCG GGCCGACCTG
GAGGCCGCCG ACTACACCAT CGAGGGCATC GGGGCGGCCG TGGGCGAGCT GGCGGCCGCC
GCCCTGCACC GCGACCAGCC GCTGCCGGCC GACCGGGCGA CCTGCGACCG CACCGAGCCG
GTCGCGCTGC TCACGCGCCT GTTCGGCCTG GGCCTGACTC TCACCCCCGA TGAGGTGGCG
CTCGCCCTGC CTCGCACGCG CGCCGAGGGG CTGGCGACGC TGGGGCTGGC CCGCATCGAG
GGCGATGGGG TGCGCGCCGT GGTGGACCTG CGCCCCCACG CCACGGAACA CGACTCCTGG
TGGGTGGTCT CCGACCTGCC GGAGCTGCAG GCCGGCGGTG GGCCCCTGCC CGAGGACCAC
GTGCTCGGCA TCGGCGGGGC GAGCGTCACC CTGGCGGCGT GGACCCCCCG GCCCGAGGTG
GCGCGCGCGT TGGACATCGG CACCGGATGC GGGGTGCAGG CTTTGCACCT GACGCACCAC
GCCCAGCGCG TGGTGGCCAC GGACATCTCC GAGCGGGCGC TGGAGTTCGC GCGCTTCACG
TGCGCGCTGA ACGGGGTGGA GCTGGACCTG CGGCACGGGT CGCTCACCGA GCCGGTCGCG
GGCGAGGAGT TCGACCTCAT CGTGAGCAAC CCGCCGTTCG TCATCACCCC GCGCACCAAG
GGGGTGCCGG TGTACGAGTA CCGCGACGGT GGGGTGGAGG CCGACGGCAT CACGTCCGGG
CTGATCGGGC AGGTGGCCGC GCGGCTGGCT CCCGGGGGCA TGGCGCAGAT GCTGGGCAAC
TGGGAGATCG GGCCCGATGA GGACTGGCGC GACCGGGTGC GGCCGTGGCT GGCGGGGCTC
GGCGTGGACG CGTGGGTGGT GCTGCGCGAG GTGCAGGACC CCGCCGAGTA CGCCGAGACC
TGGGCCCGCG ACGGCGGCCA CACCCCGGGG GACGGCCAGT ACGAGGCCAT GTACGGCGCG
TGGTTGGACG ACTTCGCGGC GCGCGGCACG GCATCGATCG GGTTCGGGGT GATCACCCTG
CATCGGCCCG AGGTCGAGCG GGAGCCGTGG ATCGCGCTGG ACGAGGCGCG CGGGCAGGTG
GACGCCGCGA TGGGGCCGCA CGTTCTGGCC GGCGTGCGGG CGCGGACCTG GCTGGCGGAG
CACTCCGACG ACGAGCTGTT GGACATCGCG TGGCAGTACG CCGATGACGT GACGCAGGAG
CGCTACTACG CCCACCCGGG CGATCCGGAC CCGCAGGTGG TGCTGATCCG GCAGGGCGGT
GGGCTGCGGC GGGCGTTCCA GGTGGACACG GTCACCGCGG GGCTGGTGGG CGTGTGCGAC
GGCGACCTGA CGGCGCGCCA GGGGCTGGCC GGCATCGCGG TGTTGACCGA GGCCGACCAG
AGCGACCTGG CCCGACAGGT GCTGCCGGTG CTGCGGGACC TGGTGGCCGA CGGGCTGCTG
GTGCGCTGA
 
Protein sequence
MSTPAQTPVP HRHPSPPAPR RVTDDGEDLT PLIESLRADL EAADYTIEGI GAAVGELAAA 
ALHRDQPLPA DRATCDRTEP VALLTRLFGL GLTLTPDEVA LALPRTRAEG LATLGLARIE
GDGVRAVVDL RPHATEHDSW WVVSDLPELQ AGGGPLPEDH VLGIGGASVT LAAWTPRPEV
ARALDIGTGC GVQALHLTHH AQRVVATDIS ERALEFARFT CALNGVELDL RHGSLTEPVA
GEEFDLIVSN PPFVITPRTK GVPVYEYRDG GVEADGITSG LIGQVAARLA PGGMAQMLGN
WEIGPDEDWR DRVRPWLAGL GVDAWVVLRE VQDPAEYAET WARDGGHTPG DGQYEAMYGA
WLDDFAARGT ASIGFGVITL HRPEVEREPW IALDEARGQV DAAMGPHVLA GVRARTWLAE
HSDDELLDIA WQYADDVTQE RYYAHPGDPD PQVVLIRQGG GLRRAFQVDT VTAGLVGVCD
GDLTARQGLA GIAVLTEADQ SDLARQVLPV LRDLVADGLL VR