| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_25080 |
|---|
| Symbol | |
|---|
| ID | 8374011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2586827 |
|---|
| End bp | 2587270 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644992734 |
|---|
| Product | predicted nucleic acid-binding protein, contains PIN domain |
|---|
| Protein accession | YP_003150237 |
|---|
| Protein GI | 256826277 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | [TIGR00028] Mycobacterium tuberculosis PIN domain family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 98 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACCC AGCCTGACGT GGCGGCTCTG TTGGACGTGA ACACCCTGAT CGCCTTGCTC
GACATCGATC ACCGTGACCA TGAGGCCGCC CACCGATGGG CTGAAGAACG CCTCTCGAAC
GGGTGGGCCA CCTGTGCCAC GACACAAATG GGCTTCCTCC GTGTCATCAG CCAGCCGGGT
TACCCCAGTC CCATCACAGT GGACGAGGCC GGACGCCTGC TCCGACGAGC GACCGACCAC
CCCTCGCACG AGTACTGGAG CTCGGAACCG CAGCCCTGTG CCGGCTCCGT GTCCCTCGAT
GTGATCACGG GCCACCGCCA GATCACGGAT GCGTACCTGC TTGCCCTTGC CGTGCACCAG
AACGGGTGCC TGGTGACCTT TGACCGACGC ATCACCACTC GTCACGTCCC AGGGGCCGGC
CAGGAGCACT TGGTCAGACT GTGA
|
|---|
| Protein sequence | MRTQPDVAAL LDVNTLIALL DIDHRDHEAA HRWAEERLSN GWATCATTQM GFLRVISQPG
YPSPITVDEA GRLLRRATDH PSHEYWSSEP QPCAGSVSLD VITGHRQITD AYLLALAVHQ
NGCLVTFDRR ITTRHVPGAG QEHLVRL
|
|---|
| |