| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_25040 |
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| Symbol | |
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| ID | 8374007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 2581524 |
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| End bp | 2584415 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644992730 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003150233 |
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| Protein GI | 256826273 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGCCA AGGGCAGCAA GCTCGTGATC GTGGAGTCGC CGACCAAGGT GAAGTCCATC
GGCCAGTACC TGGGGGACGA GTACCGCGTG GAGGCCTCCG TCGGCCACAT TCGCGACCTG
CCCACGCCCA GCGAGATGCC CGCAGACATG AAGACGGGGC CCTACGGCAA GTTCGCCGTG
GACGTGGACA ACGGCTTCGA CCCCTACTAC GTCATCGACG CGGACAAGAA GAAAAAGGTC
ACCGAGCTGC GCAAGGCCCT CAAGGAGGCC GACGAGCTCT ACCTCGCCAC CGACGAGGAC
CGCGAGGGCG AGGCCATCGC CTGGCACCTG CTGCAGGCGC TCAAGCCCAA AGTGCCGGTC
AAGCGCATGG TCTTCCACGA GATCACCAAG GACGCCATCC AGCACGCGGT GAACACCACC
CGCGACCTCG ACGACCGCAT GGTCGACGCC CAGGAGTCCC GCCGCATCCT CGACCGCCTC
TACGGCTACG AGGTCTCCCC GGTGCTCTGG CGCAAGGTCA AGCAGGGCCT GTCCGCCGGC
CGTGTGCAGT CCGTCGCCAC CCGCCTGGTG GTGGAGCGCG AGCGCGCCCG CATGGCCTTC
CGCATCGCGT CCTACTGGGA CGTGGAGGCC GACCTCGCCC CCGCCGACGA TCAGCAGTTC
ACCGCGCGCC TCACCAGCCT CGATGGGGTG CGCGTGGCCA CCGGCCGCGA CTTCACCGAT
GCGGGGGAGC TCAAGTCCTC CGCCCAGGTC ACCCACCTGG CCGAGGCCGA CGCCCGGGCC
GTCGCCTCCG GCATCGAGGC CGCGCAGGTG ACCGTCACCG ATGTCAGCGA GAAGCCGTAC
ACGCGCAAGC CGGCCGCGCC GTTCATCACC TCCACCCTGC AGCAGGAGGC CAGTCGCAAG
CTGCGCCTGG GCTCCAAGGA CGCCATGCGG GTGGCGCAGC GGCTGTACGA GAACGGCTAC
ATCACCTACA TGCGTACCGA CTCGACCACC TTGTCGCAGT CGGCCATGAC CGCGGCCCGT
CAGCAGGCTC GTGACCTCTA CGGCGCGGAC TACGTGCCGG ACTCCCCACG CTTCTACGGC
AAGAAGGCCA AGGGCGCGCA GGAGGCCCAC GAGGCCATCC GTCCCGCCGG CGACACCTTC
CGCACCCCGG CCCAGGTGGC CGGCGAGCTG CGCGGCAGCG AGTACGCCAT GTACGAGCTC
ATCTGGAAGC GCACGGTCGC CTCCCAGATG GCTGACGCCA AGGGCTCCAC GGCCACCGTC
CGCATCGGCG CGCCGCTGCA GGGCGTGCAG GTCGGGGGCA AGCCGGCGCG CCAGGCCGAG
CTCACCGCCT CGGGCACGGT CATCACCTTC CGGGGCTTCC TGGCCGCCTA CGAGGAGGGG
CGCGACGCCG ACCGTTACGG CGGGGGCGAG CAGGGCGGCT CGGGCGACGC CGGCGCGAAG
TCCGGGAAGG GTGCCAAGGA GGTGCGCCTG CCGAAGATGG CCGCAGGGCA GGAGCTGGCC
ACCTCCCGGG TGGAGGCGCT GGGGCACGAG ACCTCCCCGC CGCCGCGGTA CACCGAGGCC
ACGTTGGTGA AGGCGCTGGA GGAGAAGGGC ATCGGCCGCC CGTCCACCTA CGCGGCGACC
GTCGGCACCA TCCAGGACCG CGGGTACGTG CGCACCAAGG GCAATGCGTT GGTGCCCACC
TGGCTGGCGT TCGCCGTGAC CACCCTGTTG GAGAAGCACT TCCCCACGTT GGTGGACTAC
GACTTCACCG CATCGATGGA GGAGGGGCTC GACGCGATCG CCGCTGGCGA GGAGGACCGC
GTCGCCTGGC TGCAACGGTT CTACTTCGGT GACGAGGCGT CCTCGGCCAC CGGGTTGCGT
GAGCTGGTGG AGGACCTCGG TGAGATCGAC GCCAAGGGGG TTTCCACGAT CGACATCGGC
GACGGGATCG TCGTGCGCGT GGGTCGTTAC GGGCCGTACG TGGAGGAGAT CGCGCCGGCG
GGCACCGACC TGACCACCGG AGAGGTGCCG GACGATGCGG GGAGCGCCGC CCGTGCCGCG
GACGGCACCG CTGCCTCGGG CGAGGAGGAG GCCAAGCCGC TGCGCGCCAG CATCCCGGAG
GACATCGCGC CGGACGAGCT GACCCCGGCG ATGGCGCGGG AGTACCTGGC CGAGGCCGCC
TCCGACGGGC GAGTGCTGGG TCAGGACCCC GAGACCGGCC GCGACATCGT GGCCAAGACC
GGGCGGTACG GGCCGTACGT CTCCGAGGTG TTCACCGACG AGGACGTCGC CCGCTTCGAG
GCCGAGGGCA AGAAGACCAC CGGCCGCGGC AAGGACCTGG TGAAGCCGCG GACCGGCTCG
CTGCTGGCCT CCATGGACGT GCGGACGGTG ACGCTCGAGG ACGCCCTGAA GATCCTCTCG
CTGCCGCGGG TGGTGGGTGC GGACCCGGAG AGCGGCGCCG AGATCACCGC GCAGAACGGG
CGTTACGGGC CGTACCTGAA GAAGGGTACG GACTCGCGCT CGCTGGCCAG TGAGGAGCAG
ATCTTCGAGA TCACCCTCGA GGAGGCCCTG AAGATCTACG CCGAGCCCAA GCGGCGCGGG
CGCTCGGCGG CCAACCCGCC GCTGGCGGAG TTCGCCGAGG ACCCGGTCTC GGGCAAGAAG
GTGGTCATCA AGGACGGCCG CTTCGGGCCC TACATCACCG ATGGCGAGAC GAACGTGACC
GTGCCGCGCG CCATGCGGCC GGAGGACGTC TCGGAGCTGC AGGCCTTCGA GCTGCTCGCG
CAGAAGCGGG CCGAGGGGCC GAAGAAGAAG CCGGTGCGCA AGAGCTCGGG CACCACCCGC
AAGGCGCCGG CGAAGAAGCC GGCCGCCGGG ACTGCGCGCA CGGTGAAGGC CGGGAGCCGC
AAGAAGAGCT GA
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| Protein sequence | MAAKGSKLVI VESPTKVKSI GQYLGDEYRV EASVGHIRDL PTPSEMPADM KTGPYGKFAV
DVDNGFDPYY VIDADKKKKV TELRKALKEA DELYLATDED REGEAIAWHL LQALKPKVPV
KRMVFHEITK DAIQHAVNTT RDLDDRMVDA QESRRILDRL YGYEVSPVLW RKVKQGLSAG
RVQSVATRLV VERERARMAF RIASYWDVEA DLAPADDQQF TARLTSLDGV RVATGRDFTD
AGELKSSAQV THLAEADARA VASGIEAAQV TVTDVSEKPY TRKPAAPFIT STLQQEASRK
LRLGSKDAMR VAQRLYENGY ITYMRTDSTT LSQSAMTAAR QQARDLYGAD YVPDSPRFYG
KKAKGAQEAH EAIRPAGDTF RTPAQVAGEL RGSEYAMYEL IWKRTVASQM ADAKGSTATV
RIGAPLQGVQ VGGKPARQAE LTASGTVITF RGFLAAYEEG RDADRYGGGE QGGSGDAGAK
SGKGAKEVRL PKMAAGQELA TSRVEALGHE TSPPPRYTEA TLVKALEEKG IGRPSTYAAT
VGTIQDRGYV RTKGNALVPT WLAFAVTTLL EKHFPTLVDY DFTASMEEGL DAIAAGEEDR
VAWLQRFYFG DEASSATGLR ELVEDLGEID AKGVSTIDIG DGIVVRVGRY GPYVEEIAPA
GTDLTTGEVP DDAGSAARAA DGTAASGEEE AKPLRASIPE DIAPDELTPA MAREYLAEAA
SDGRVLGQDP ETGRDIVAKT GRYGPYVSEV FTDEDVARFE AEGKKTTGRG KDLVKPRTGS
LLASMDVRTV TLEDALKILS LPRVVGADPE SGAEITAQNG RYGPYLKKGT DSRSLASEEQ
IFEITLEEAL KIYAEPKRRG RSAANPPLAE FAEDPVSGKK VVIKDGRFGP YITDGETNVT
VPRAMRPEDV SELQAFELLA QKRAEGPKKK PVRKSSGTTR KAPAKKPAAG TARTVKAGSR
KKS
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