Gene Ksed_25020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25020 
Symbol 
ID8374005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2580795 
End bp2581199 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID644992728 
Productpredicted nucleic-acid-binding protein, contains PIN domain 
Protein accessionYP_003150231 
Protein GI256826271 
COG category[R] General function prediction only 
COG ID[COG5611] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones98 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCC TCGACACCAA CGTGCTCGTG CGCCTGCTGG TGGATGACGA TGCCGAGCAG 
TCCGGTCTGG CGCGCGAGCT GGCGTCCACC GTGACCCCTG CCGCGCCCGC CTTCGTGCCG
CTGGTGGTGT GGGTGGAGAC CTACTGGGTC CTGCACCGGG CCTACGGCAT CGCGCCGGAT
GAGGTGCTCG AGGTGTTCGA TGAGCTCGCT GGGCGTGACG AGGTCCTCAG CGAGAACCCA
CGGGCCGTTG CCCACGCTCT GCGGGCGGCG CGGGAGGGGG TCGACTTCGC CGACGCCCTC
ATCGACGCCT CGGCGCAGCA GGCCGGCTGC GAGGTCGTGG CGTCGTTCGA CCAGAAGGCG
CAGCGGATGC TGGGCTGGTC GTCGCCGGAG ACTCTGCGGG GGTGA
 
Protein sequence
MIGLDTNVLV RLLVDDDAEQ SGLARELAST VTPAAPAFVP LVVWVETYWV LHRAYGIAPD 
EVLEVFDELA GRDEVLSENP RAVAHALRAA REGVDFADAL IDASAQQAGC EVVASFDQKA
QRMLGWSSPE TLRG