Gene Ksed_25000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25000 
Symbol 
ID8374003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2579330 
End bp2580121 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content74% 
IMG OID644992726 
ProductDNA-binding domain-containing protein, AraC-type 
Protein accessionYP_003150229 
Protein GI256826269 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones98 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCGC ACCGGTGGTG GGTGCAGTGG GCGCACGACG GTTCGACGCC GCAGAGTCCG 
CAGGTGCTGG GCCACCCCGT GGTGCACCTG ACCGTCGAGT GGGGCCGTTC GTTGGCGGGG
GATCCGGCGC CGATGCACGG CCACCTGAGC CCCTGCATCC TGCTGCACGG CCCGATGCGT
GCCACGTTCT CGGTGGACCT CCCTCCGGAG GGCTGGGTCG CAGGGATCGC CTTCCACCCC
GGCGCGTTCG CCGCAGCCAC CGGCATCGAG GCCGACCGGT ACGCGGCGCA GGTGGTGCCA
GCGGCGGACC TGCTCGGGCC GGCCGCGTCC ACCTGGCTGG ACCGCGTCGT GCCCCACGCA
CATCGAGAGG GCCCGGCCGA GGCATCCGCG ACCCTCCTGG ATGCAGCCGC GAGTCGTCTC
CGACTGCCCG GTCCCGGGGA GGCGCCCGGG TACGAGCTCG TGCGTGCCGC GTGCGACCGG
ATGCAGAACC AGGGCCACCG GGCCGTGGCC GACGTGGCCC TCGACCTGCA CGTCTCGGTG
CGCACCCTGC AGCGGGAGTT CCGCCGTCTG GTGGGGCTCA GCCCGCTGGT CGTGCTCCGG
CGCTACCGGT TGCAGGAGGC GGCAGCCCGG CTGGAGGAGG GTGGGGCTCC GGACCTGGCA
TCCCTCGCCG CCGACCTGGG TTTCAGCGAC CACGCCCACC TCACACGGGA GTTCACCGCG
GCGGTGGGGC TGACCCCATC GGCCTACCGC GATCGGGTGG CCAGGGCCCG CGCAGTTCAC
GCACGGGCCT GA
 
Protein sequence
MVAHRWWVQW AHDGSTPQSP QVLGHPVVHL TVEWGRSLAG DPAPMHGHLS PCILLHGPMR 
ATFSVDLPPE GWVAGIAFHP GAFAAATGIE ADRYAAQVVP AADLLGPAAS TWLDRVVPHA
HREGPAEASA TLLDAAASRL RLPGPGEAPG YELVRAACDR MQNQGHRAVA DVALDLHVSV
RTLQREFRRL VGLSPLVVLR RYRLQEAAAR LEEGGAPDLA SLAADLGFSD HAHLTREFTA
AVGLTPSAYR DRVARARAVH ARA