Gene Ksed_24530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24530 
Symbol 
ID8373956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2532883 
End bp2533668 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID644992679 
Productsugar phosphate isomerase/epimerase 
Protein accessionYP_003150183 
Protein GI256826223 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.482145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTT GGGCCGTGGG GCTGTCCGCC TCGAGCTGCT ACCCGCAGAA GACCGCCTAC 
ACCTTCGCCA TGGCCGAGCG GCTCGGCTAC GACGGGGTGG AGGTCATGGT CTGGGGCGAG
AAGCTCAGCC GTGACGTGCC GCGGTTGCAA CGCCTCGCGG AGGACCACGG CCAGCCGATC
CTCTCGGTGC ACGCGCCCAC CCTGTTCTTC CTGCAGCACG TCTGGGGCAC TACCTGGGAC
CAGATCGACA GGTCGATCGA GCTGGCCGAG GAGCTCGCCT GCCCGACGGT CGTGGCCCAC
CCGCCCTTCG CCTGGCAGCG GGCCTACGGC CGTGCATTCG TCGAGGGGAT CGCCGAGCGG
CAGGCGCGCA CCGAGGTCAA GATCGCCGTG GAGAACATGT ACCCCTGGCG GGTGCCCGGC
ACCGGGGCCC GGGGGAAGGT GCCCATGTAC CTGCCGGGCT GGGACCCCAC ATACCACGAG
TACGCCCACG TGACGCTCGA CCTCTCGCAC AGCGCGACCG CCCACGCCGA TGCGGTGGCC
ATGGCCCGTG CGGCGGGGCC CACCCTGGCG CACGTGCACC TGGCCGACGG TTCGGGCTCG
CTCAAGGACG AGCACCTGGT GCCCGGGGAC GGGTCGCAGC CGTGCGAGGA GGTGCTGGGG
ATGCTGGGGG AGATCGGGTT CTCCGGGTCG ATCATCGTGG AGGTGGGGAC CCGCGGCGTG
GACGAGGCGA CGCGAGTGGA CAGGCTGACC CGGTCGCTGG CGTTCGCCCG CCAGCACGCC
CACTAG
 
Protein sequence
MSRWAVGLSA SSCYPQKTAY TFAMAERLGY DGVEVMVWGE KLSRDVPRLQ RLAEDHGQPI 
LSVHAPTLFF LQHVWGTTWD QIDRSIELAE ELACPTVVAH PPFAWQRAYG RAFVEGIAER
QARTEVKIAV ENMYPWRVPG TGARGKVPMY LPGWDPTYHE YAHVTLDLSH SATAHADAVA
MARAAGPTLA HVHLADGSGS LKDEHLVPGD GSQPCEEVLG MLGEIGFSGS IIVEVGTRGV
DEATRVDRLT RSLAFARQHA H