Gene Ksed_24280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24280 
Symbol 
ID8373931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2509548 
End bp2510447 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content75% 
IMG OID644992654 
Product1,4-dihydroxy-2-naphtoate prenyltransferase 
Protein accessionYP_003150158 
Protein GI256826198 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGC TCGCCCAGTG GATCGACGGC GCCCGCCCCC GCACCCTGCC CGCGGCCGTC 
GCACCGGTGG CGGTGGGCAC CGGTGCCGCC TTCGCCCTGC GCGAGGAGGC GGGCCACGGC
GACGCCGGCC ACCTCGGGTT CGCCCTGCTG GCCCTGGTCG TCGCCCTGGC CCTGCAGGTG
GGCGTGAACT ACGCCAACGA CTACTCCGAC GGCATCCGCG GCACCGACGA GGAGCGCGTC
GGCCCGGTAC GCCTCGTCGG CCAGCGGCTG GCCGCACCCG GCACCGTGAA GCGCGCGGCC
TTCACCTGCT TCGGGGTGGC CGGGGTGGCC GGCGTCCTGC TCTGCCTGCT CTCCGGCACC
TGGTGGCTGC TGCTCGCCGG CGTGGCGGCG GTCTGGGCGG CCTGGAACTA CACCGGCGGC
AAGAACCCGT ACGGCTACCG CGGACTGGGC GAGGTGGCGG TGTTCGTCTT CTTCGGACTC
GTGGCCGTGC TCGGAACCCA GTTCACGCAA GCAGGCGCCA TCGACCTCGC GGGCCTCGCC
GGCGCCGTCG GCATCGGGGC CGTGGCCGCG GCGCTGAACC TCACGAACAA CCTCCGCGAC
ATCGACGGCG ACGCAGCCTC CGGCAAGGTC ACCCTGGCGG TGCGGCTCGG GGCGCCGCGC
ACCCGGCGGC TGTATGCCGG CCTCATCGCG CTGGCCTTCG TGATGGTGCT GGCCTCCGGC
CTCGTGCACA CCCCGGCGGT CCTGGGCCTA CTCGCCCTGC CCTTGGCCGT TGCGCCCGTG
CGGTCCGTCC TGGAGCGGGC GCGCGGGCGG TCGCTGATCG GCGTGCTGGG GCAGACCGGA
CGGCTCCAAC TCGCCCTGGG CCTGCTGTGG GGCCTCGGCC TCTGGTGGGC CGGTCGCTGA
 
Protein sequence
MATLAQWIDG ARPRTLPAAV APVAVGTGAA FALREEAGHG DAGHLGFALL ALVVALALQV 
GVNYANDYSD GIRGTDEERV GPVRLVGQRL AAPGTVKRAA FTCFGVAGVA GVLLCLLSGT
WWLLLAGVAA VWAAWNYTGG KNPYGYRGLG EVAVFVFFGL VAVLGTQFTQ AGAIDLAGLA
GAVGIGAVAA ALNLTNNLRD IDGDAASGKV TLAVRLGAPR TRRLYAGLIA LAFVMVLASG
LVHTPAVLGL LALPLAVAPV RSVLERARGR SLIGVLGQTG RLQLALGLLW GLGLWWAGR