Gene Ksed_24140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24140 
Symbol 
ID8373917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2497343 
End bp2498416 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content77% 
IMG OID644992642 
Productenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase 
Protein accessionYP_003150146 
Protein GI256826186 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.595328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCCCT GCCCCACCGA CCGCCCCCAG GCGGTGAGCG ACCCCACCCT GGGCCGTGAG 
CTCCCCGCGC TCGAGGAGCT GCTCGCCCAC CTGGTGGTGG TCCGCCTGCC CATGGTGGTG
CGCTTCCGGG GCCTGACCAC CCGCGAGACC GCGTTGGTCC GCGGGCCCCT CGGCTGGGCC
GAGTTCGCCC CGTTCACCGA GTACGACGAC GCCGAGGCCT CCCGCTGGCT CGCCGCCACC
CTGGAGGCCG GCTGGTGGGG CTGGCCCGCC CCCGTCCGCT CCACGGTGCC GGTCAACGTC
ACCGTGCCGG CCGTCGCCGC GGAGGAGGTC CCGGCCGTCG TGGCCCGCGT GCCCGGCGCC
GGGACCGCCA AGATCAAGGT CGCCGAGCGC TCCGTGCTGG ACCGTGACGA GGCCGCCTCC
ACGGCGAACG ACCTCGCCCG CATCGCCGCC GTCCGCCGCG CGATGGGGCC CGACGCCGCC
CTGCGCATCG ACGCCAACGG GGCATGGTCC GTGCGTCAGG CCGCCCGGGC GCTCGAGCAG
GTGGCCGCCA CGGGGGAGCG CCTCGACTAT TGCGAGCAGC CCTGCGCCAC GGCTGCGGAG
CTCGCTGAGC TCCGCGAGCT ATTGGTTGCC CGCGGTGTGC CCACCCGCAT CGCGGCCGAC
GAGTCCATCC GCCGCGCGGC CGACCCCCTG CTCGTGCGCG CGCTGGGCGC GGCCGACCTC
ATCGTCGTCA AGGCAGCGCC GATGGGGGGA GCGGCCGCCG CCGCGCAGAT CATCACCGCC
ACCGGGTTGC CCACGGTCGT GAGCTCGGCC CTGGAGTCGA GCGTGGGCCT GGGGGCGGGC
GTCGCCCTGG CCTCCTCGAT GCCGGAGCTC GCCGGAGCGT GCGGGCTCGG CACCGCTGCG
CTCTTCTCGC ACGACGTCAC CTCGGCGCCC CTGGTGCCGG AGGGTGGGCG GATCGCCCTG
CGCCGCGTCG AGCCGGACCG GGCCGCGGAG CTGGCCGCGC CGGACCGGAC CGACTGGTGG
GCACGCCGCA TCGAGCGGTC CCTGGAGCTG CTGCGGACCG GTCAGGCAGG CTGA
 
Protein sequence
MLPCPTDRPQ AVSDPTLGRE LPALEELLAH LVVVRLPMVV RFRGLTTRET ALVRGPLGWA 
EFAPFTEYDD AEASRWLAAT LEAGWWGWPA PVRSTVPVNV TVPAVAAEEV PAVVARVPGA
GTAKIKVAER SVLDRDEAAS TANDLARIAA VRRAMGPDAA LRIDANGAWS VRQAARALEQ
VAATGERLDY CEQPCATAAE LAELRELLVA RGVPTRIAAD ESIRRAADPL LVRALGAADL
IVVKAAPMGG AAAAAQIITA TGLPTVVSSA LESSVGLGAG VALASSMPEL AGACGLGTAA
LFSHDVTSAP LVPEGGRIAL RRVEPDRAAE LAAPDRTDWW ARRIERSLEL LRTGQAG