Gene Ksed_24050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24050 
Symbol 
ID8373908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2488278 
End bp2489030 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content74% 
IMG OID644992633 
Productpyridoxamine-phosphate oxidase 
Protein accessionYP_003150137 
Protein GI256826177 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCT CGGAGCTGGC CCGACGCCGC GGTCGCCGCC TTGAACGGCT CGAGTACACC 
GGCGAGGGCC TGGACCCGGA GAGCCTGCCG CCGGCGCCGT GGTCCGTCAT CGACGAGTGG
GTGTCGGCCG CCCACCACCG GGCGCTGGAG AGGGGGGACG TGCCGGAGCC GGCCGCCGTC
GCCCTGGCCA CGGTCGATGC GGACGGGGCC CCCGATGTGC GCACCGTCCT GTGCCGTGAC
ATCGCTCCGC AGGGCCTGCG CCTGTTCACC TCCTTGGTCT CGGCCAAGGC CGAACAGATC
GCCGCCGACC CCCGCGTCGC CGTGACCTGG ACCTGGCCCA GCATGTTTAG GGCCCTGCGC
TTCCGGGGCG TCGCGGAGGA GCTCCCGCGC GACCAGGTGG ACGAATACTT CCGGCAGCGG
CCCTGGGGTG CCCGCATCGG GGCCCACGTG AGCCACCAGT CGCACGCGAT GGCCACCCGC
CAGGAGCTCG TGGACAGGGA GGCCGAGCTG GCCACGCGGT GGCCGGACCG CTCCCGCCCG
GACGACGTCC CGACCCCCGG CCACTGGGGC GGCTACTTGG TGCGCCCCTA CCAGGTGGAG
GTGTGGACCG GGCGCCAGTC GCGGCTGCAC GACCGCTGCC GGTGGGAGCT CGTCGAGCCC
CTCGACCCCA CCCAGTCGGC GGCCGACCAG CGCGCGTTGC TGCTGCCGCT GGACGACGAG
ACCGCCTGGA CGCACACCCT GCTGCAGCCC TGA
 
Protein sequence
MHPSELARRR GRRLERLEYT GEGLDPESLP PAPWSVIDEW VSAAHHRALE RGDVPEPAAV 
ALATVDADGA PDVRTVLCRD IAPQGLRLFT SLVSAKAEQI AADPRVAVTW TWPSMFRALR
FRGVAEELPR DQVDEYFRQR PWGARIGAHV SHQSHAMATR QELVDREAEL ATRWPDRSRP
DDVPTPGHWG GYLVRPYQVE VWTGRQSRLH DRCRWELVEP LDPTQSAADQ RALLLPLDDE
TAWTHTLLQP