Gene Ksed_23880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23880 
Symbol 
ID8373891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2470686 
End bp2471663 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID644992616 
ProductUDP-glucose pyrophosphorylase 
Protein accessionYP_003150121 
Protein GI256826161 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAG CGGTGTGGGG AGCGGTTGTC GGCGGCTTCC CCTACGGTGA GCCCATGAAC 
ACGCGACGTC CGGTCCGCAA GGCAGTGATC CCCGTGGCTG GGTTGGGAAC TCGTTTCCTG
CCCGCCACCA AGGCCATCCC CAAGGAGATG CTGCCGGTGG TGGACAAGCC CGCTATCCAG
TACGTGATGG AGGAGGCCGT GCGCGCGGGG GTGGAGAACG TGGTGATGGT CACCGGGCGC
AACAAGGGTG CGCTGGAGGA CCACTTCGAC CGTCACTGGG AGCTGGAGAA GGCCCTGGAG
AAGAAGGGCG ACGACCTGCG CCTGCGTCGA GTGCAGAAGT CCAACGAGAT GGGGGCCCCG
CACTTCGTGC GCCAGGGGGA GCCCAAGGGG TTGGGCCACG CCGTGCTGTG CGGGCGGCCG
CACGTGGGGG ACGAGCCGTT CGCTGTGTTG CTGGGTGATG ACCTCATCGG TGCGCAGGAC
CACCTGTTGG AGCAGATGAT CGCGGTGCAG TCCGAGCGGG GCGGGTCGGT CGTGGCGCTG
ATGGAGGTGC CGGCCGACCA GGTGAACCTG TACGGCTGTG CGGCCACTGA GGGCGAGCCG
GACGCTGATG GGGTGGTGCG GATCACGGGG TTGGTGGAGA AGCCCGACCC GGCGGATGCG
CCCAGCAACC TGGCGATCAT CGGGCGGTAC GTGTTGGACC CGAGCATCTT CGACGTGCTG
GAACAGACCC CTCCGGGGCG GGGTGGGGAG ATCCAGTTGA CCGATGCGTT GGAGGAGCTG
GCCACTGCCT CGGAGGAGTC CGGTGGTGGT GTGTGGGGTG TGGTCTTCCG GGGCAACCGC
TATGACACCG GTGACCGGTT GGACTACCTG AAGGCCGTGG TGCGTCTGGG GCGCGCGCAC
GGTGAGTTCG GCCAGGAGTT CGACGGTTGG CTGCGCGAGT ACGTCCAGGA GCTGGGCCAG
CCCGGCCGGG ACGCCTGA
 
Protein sequence
MRAAVWGAVV GGFPYGEPMN TRRPVRKAVI PVAGLGTRFL PATKAIPKEM LPVVDKPAIQ 
YVMEEAVRAG VENVVMVTGR NKGALEDHFD RHWELEKALE KKGDDLRLRR VQKSNEMGAP
HFVRQGEPKG LGHAVLCGRP HVGDEPFAVL LGDDLIGAQD HLLEQMIAVQ SERGGSVVAL
MEVPADQVNL YGCAATEGEP DADGVVRITG LVEKPDPADA PSNLAIIGRY VLDPSIFDVL
EQTPPGRGGE IQLTDALEEL ATASEESGGG VWGVVFRGNR YDTGDRLDYL KAVVRLGRAH
GEFGQEFDGW LREYVQELGQ PGRDA