Gene Ksed_23830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23830 
Symbol 
ID8373886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2465984 
End bp2467336 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content71% 
IMG OID644992612 
Producttransposase family protein 
Protein accessionYP_003150118 
Protein GI256826158 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.955203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG GTACCTGCAC CACGCCTGAT CTGACGACGT TCTGCCGCCT CGACGGCCTC 
GGGTTGGAGG TGACCGGGCA ACGCCTCGAG CCGGACCGGG CGGTGCTGGC CTGCCGGGTC
GTCGATGATG ACCGGTGGTG CCGGCGGTGT GGCTGTGAGG GGACCGTGCA CGACGTGGTC
ACGCGACGCC TGGCACACGA GCCGTTCGGG TGGCGACCCA CGACGTTGCT GGTCGCGGTC
CGCCGGTACC GGTGCACCGG CTGCGCGCGG ATGTGGCGGC AGGACACCAC TGCGGCGGCG
GAGCCGAGGG CCAAGATCTC CCGCGGTGGG CTGCGCTGGG CGTTGCTCGC GCTGGTCGTG
CAGCACCTGA CCATCGCTCG GGTCGCCGAG GCGTTGGCGG TGGCGTGGGA CACCGCCAAC
GACGCCGTCC TGGCCGAGGG CCGGCGCGTC CTGATCGGTG ACCCGGCCCG GTTCGAGGGG
GTGAAGGTGG TCGGGGTCGA CGAGCACGTG TGGCGGCACA CGCGCAAGGG CGAGAAGTAC
GTCACCGTGA TCATCGACCT CACCCCGATC CGAGACGACA CCGGCCCCGC CCGGTTGCTG
GACATGGTCG AAGGCCGGTC CAAGGCCGCG TTCAAGACCT GGCTCGCCGA GCGGCCACAG
GCGTGGCGTG ACGCCGTGGA GGTGGTCGCG ATGGATGGGT TTCCCCCGGC TGCGCCGCTG
ACGCGGAGTA TCGCAGCGGG CGGTGCCCCC ACCGGCTTCA AGACCGCAGC CGCCGAAGAG
CTCCCGTGCG CCCTCGCGGT GATGGACCCC TTCCACGTCG TGCGCCTCGC CGGGGACGCC
CTGGACTCCT GCCGCCGCCG GGTCCAACAA GACCTCCACG GCCACCGCGG CCTCAAGAAC
GACCCGCTCT ACCGGGCCCG GCGCACCCTA CACACCGGAG AGGACCTGCT CACCGACCGC
CAACGAGAAC GACTCATCGT CCTGTTCACC AACCCCGACC ACGTCGAGGT CGAGGCCACG
TGGGGCATCC TGCAACGGAT GATCGCCGCC TACCGACACC CCGACCGGGC AACCGCCCGC
GCGGCGATGA CCGCCGTCAT CGACGCCCTC CGCGACGGCG TGCCCGCGGC CCTCGTCGAG
CTCCGTCGCC TCGGCCGGAC CCTGAACCAG CGCGCCGCCG ACGTCCTGGC CTACTTCGAG
CGGCCCGGTA CCTCCAACGG ACCCACCGAA GCCCTCAACG GCCGCCTCGA ACACCTACGC
GGCTCCGCCC TCGGCTTCCG CAACCTCACC AACTACATCG CCCGCAGCCT GCTCGAGACA
GGCGGCTTCC GAACCCACCC TGGATTGGGA TGA
 
Protein sequence
MPDGTCTTPD LTTFCRLDGL GLEVTGQRLE PDRAVLACRV VDDDRWCRRC GCEGTVHDVV 
TRRLAHEPFG WRPTTLLVAV RRYRCTGCAR MWRQDTTAAA EPRAKISRGG LRWALLALVV
QHLTIARVAE ALAVAWDTAN DAVLAEGRRV LIGDPARFEG VKVVGVDEHV WRHTRKGEKY
VTVIIDLTPI RDDTGPARLL DMVEGRSKAA FKTWLAERPQ AWRDAVEVVA MDGFPPAAPL
TRSIAAGGAP TGFKTAAAEE LPCALAVMDP FHVVRLAGDA LDSCRRRVQQ DLHGHRGLKN
DPLYRARRTL HTGEDLLTDR QRERLIVLFT NPDHVEVEAT WGILQRMIAA YRHPDRATAR
AAMTAVIDAL RDGVPAALVE LRRLGRTLNQ RAADVLAYFE RPGTSNGPTE ALNGRLEHLR
GSALGFRNLT NYIARSLLET GGFRTHPGLG