Gene Ksed_23680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23680 
Symbol 
ID8373871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2454784 
End bp2455683 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content64% 
IMG OID644992598 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003150104 
Protein GI256826144 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG TCATCACTAC CCGCGGATTG ACCAAGCAGT TCAAGACCCA CACGGCTGTC 
AATTCCCTCG ATCTGGACGT CCCGCAGGGC CACGTGTATG GGTTCCTCGG GCCGAACGGA
TCGGGCAAGT CGACCACGAT GAAGATGCTG TTGGGTCTCA CCCAGCCCAC CAGCGGTGAC
ATCGACGTGC TCGGCGAGCC CCTCACGCGC GCATCGCGCA CCAAGCTCCT GCCGTCGATC
GGGTCGATGA TAGAAGCTCC TCCCGGGTAC GGGCACCTCA CCGGCCGGGA GAACATGCGC
ATCGTCCAGG ACATGCTCGA CTTGTCCACC GCACAGATCG ACCACGCGCT GGCGACTGTC
CGGTTGACTG AGCAGCAGCA CAAGCTGGTC CGCAACTATT CCCTCGGCAT GAAGCAGCGC
CTCGGCATCG CGATGGCACT GGCCCGCGAT CCCGCACTGC TCATCCTCGA CGAACCGACC
AACGGCCTCG ACCCCGCCGG GATCGAGGAG ATTCGCATGC TGCTCGTGGA CCTCGCGGGT
CGTGGGATCA CGGTCATGGT GTCGAGCCAC CTGCTCGATG AGATCGACAA GATGGCCAGC
GTCCTGGGCA TCCTCTCCAG CGGGACGATG ATCTTCCAGG GCAGCCGCGA CCAGCTCTTC
GAGCAATCCG TGCCGGATCT GATCATCGAG ACTTCCGACC CGCAGGCCGC CCTCGCACAG
GGCATCACGG CAACCCGGGT TCCTGAGGGC ATCAGGATGA GCGGGATCGA CAAGGACGAG
ACCGCGAAAG TCGTCTACCA GCTCGCCGTC GCGGGCGTCC CGATCTACGA GGTGCATCGC
GTCGCGCAGA GCCTCGAAGA TGTGTTCATG GACCTCACCG GCAGGGGTGG TCTGCTGTGA
 
Protein sequence
MTSVITTRGL TKQFKTHTAV NSLDLDVPQG HVYGFLGPNG SGKSTTMKML LGLTQPTSGD 
IDVLGEPLTR ASRTKLLPSI GSMIEAPPGY GHLTGRENMR IVQDMLDLST AQIDHALATV
RLTEQQHKLV RNYSLGMKQR LGIAMALARD PALLILDEPT NGLDPAGIEE IRMLLVDLAG
RGITVMVSSH LLDEIDKMAS VLGILSSGTM IFQGSRDQLF EQSVPDLIIE TSDPQAALAQ
GITATRVPEG IRMSGIDKDE TAKVVYQLAV AGVPIYEVHR VAQSLEDVFM DLTGRGGLL