Gene Ksed_23570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23570 
Symbol 
ID8373860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2444181 
End bp2444984 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID644992589 
ProductABC-type polysaccharide/polyol phosphate export systems, permease component 
Protein accessionYP_003150095 
Protein GI256826135 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.24456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACACCATCAC CGCAACCAGC TCCGAGAGAC GTCCGGCAGG GCTGCTACGG 
CACAGCCTGA TCCTGGCCCG TCGGAGCCTT GCCAAGTCCG CGAGGAACCC CGGTGCGCTG
GTCAACGGAG TGGTCACCCC GGCGATCTTC CTGCTGCTGT TCGTCTATCT CTTCGGCGGC
TCGGTTGCGG GTTCCACCGA CGAGTATCTT CTCTATCTGT TTCCGGGAAT CGTGGTCATG
GGCGCAGGAC TCTCCGGCAT GCTTTCGAGC GGCCTGAGCA TCAACATTGA CATGAAGAAG
GGTGTCTTCG ACCGCTTCCG CAGCTTGCCG ATCGGACGAT CAGCACCCCT GCTCGGGTCG
ATCATGGCCG ACATGGTGCG CTACATCATC GCCATCGCGT TGCTGTTCGG GATCGGCTAC
CTCATGGGTT TCCGCATCCA AACCGACGCC GGATCATCCC TGGCAGCAGT CGTTCTCGTG
TTGGCCTTCG GGTTCTGCTT GAGCTGGGTG ACCGTCTTCC TCGGCGTGCT CGTCAAGGAC
GAGGGCGCAG TCATGGCCTT CGCGTTCATC GTGTTCATCC CGCTGATGCT CGGCTCTAGC
CTCGCCGCCC CGATCGACAC GCTCCCCGCA TGGCTCCAAG CCTGGGCAAA CATCAACCCC
GTCACGCACG CGATGGACGC TGCTCGTGCA TTGCTGGCTG GAGCACCGGC AGGAAACTCG
ATCGTCCAGA CGATCATCTG GTCCGTCGGA ATCTTGATCG TCTTCTGCCC GCTAGCGATC
GTCTCCTACA GCCGTAAGCG CTGA
 
Protein sequence
MSADTITATS SERRPAGLLR HSLILARRSL AKSARNPGAL VNGVVTPAIF LLLFVYLFGG 
SVAGSTDEYL LYLFPGIVVM GAGLSGMLSS GLSINIDMKK GVFDRFRSLP IGRSAPLLGS
IMADMVRYII AIALLFGIGY LMGFRIQTDA GSSLAAVVLV LAFGFCLSWV TVFLGVLVKD
EGAVMAFAFI VFIPLMLGSS LAAPIDTLPA WLQAWANINP VTHAMDAARA LLAGAPAGNS
IVQTIIWSVG ILIVFCPLAI VSYSRKR