Gene Ksed_23540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23540 
Symbol 
ID8373857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2441262 
End bp2442134 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID644992586 
Producttransposase 
Protein accessionYP_003150092 
Protein GI256826132 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACC CGCTGGTCCG TGACCTTGCC GCTGACGGGA TCCCCGTCAC GGTGGCCTGC 
CGGGTGCTGA AGTTCTCCCC GCAGGCGTTC TACGCCTGGT GTGCCCACCC GGTCAGCGAC
CGGGACCTGG TGGATGCCTA CGCGATGAAC GCCGCGTACG AGATCCACGC CGAGGACCCT
GGACTGGGGT ATCGATTCAT CGCTGATGAA CTCGCGGACG CCGGTCATGC CCTGTCTGAG
CGACGCGTGT GGAAGATCTG CCACCAGGGG CAGATCGTCT CCGCGCACTC CCGTACCCGG
GGTCGGTGGA AGAAGCCCGG CCCGCCGGTC CACGACGACC TCGTCCAGCG CGATTTCACC
GCCGAGGCCC CGAATCGGTT GTGGTTGACC GACATCACCG AGCACCCCAC GGCCGAGGGG
AAGTTGTACC TGTGCGCCGT GAAGGACGTC TGGTCACGGC GGATCGTGGG GTACTCCATC
AATGACCGGA TGACCTCCCA GCTGGCCGTC GACGCCCTGG AGATGGCCAT CGCCCGCCGG
GGCCGCGACA CCACCGCCGG GTGCGTGGTC CACGCCGACC GGGGCAGCCA GTTCCGGTCG
CGCACGTACC TCTGCGCGCT GCACCGGCAT GGCCTGACCG GGTCCATGGG GCGTGTGGCT
TCCAGCGCGG ACAACGCCGC GATGGAGTCC TTCTTCGCCC TGGTGCAGAA GAACGTCTTG
AACAGCCGCC GCTGGGCCAC CCGGGAGCAG CTCCGGCTGG CCATCGTCAC CTGGATCGAG
CGGACCTACC ACCGCAGACG CCGGCAACGG GCTCTGGGCA AGACCACCCC GATCGAGTTT
GAGACCATCT ACTGGCCCGC TCACGCGGCC TGA
 
Protein sequence
MTYPLVRDLA ADGIPVTVAC RVLKFSPQAF YAWCAHPVSD RDLVDAYAMN AAYEIHAEDP 
GLGYRFIADE LADAGHALSE RRVWKICHQG QIVSAHSRTR GRWKKPGPPV HDDLVQRDFT
AEAPNRLWLT DITEHPTAEG KLYLCAVKDV WSRRIVGYSI NDRMTSQLAV DALEMAIARR
GRDTTAGCVV HADRGSQFRS RTYLCALHRH GLTGSMGRVA SSADNAAMES FFALVQKNVL
NSRRWATREQ LRLAIVTWIE RTYHRRRRQR ALGKTTPIEF ETIYWPAHAA