Gene Ksed_23500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23500 
Symbol 
ID8373853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2438581 
End bp2439501 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID644992583 
ProductDNA-binding domain-containing protein, AraC-type 
Protein accessionYP_003150089 
Protein GI256826129 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC GTGCACTGCG CGGTTATCAG GTGTTGTTGG CGCGGACGCA GACGGTGCAT 
CGCCCGGTCG GGCCACTGGC GTATGACTGC GTGAAAGTCA TCATCGTCCG CGACGGTAGC
GCGATCCTGT TCAGCGAGTT CGGGCAGAAA CCGGTCCGAC CCGGCGATGT GGTTGTGCTT
GGCCCGAACG TCTTGTGCGG GTCCGAGCCT GAAGGTCACA TCACCGTCAC GACGATCTAC
GCCGACACCG ACTATGTGAT CGATCAGGCG TTCTGGCAGT ACGCGGCGAT CCTCCACGAC
CGGCTCGACG CGCCAGGGTT CGTGCGGGAG GCGTTCACCG ATCCGGCGCA GATCATCCGG
CTCGGTGAGG AGCGTGCGGG GTTGTTGATG CCGTGGCTGG ACGAGTTGGT CGCGCTGAGC
GTCGATGGAG AATTGGAGAG GTTTCATCGG ACGCAGGCGT TGTGGTTCGC GATCATGGAC
CGCATCGCCC CGTACCTCCA CGTCACCGAT CACCGGATTT CGCCGTCGCA GCGGGCGCGG
GTGGTGCCGG TGCATCCGCG TGTGCGGCGG TTCGCGCCGA CGCGGAGCGA GGCCGCCGAG
GTACGCGAAG CACTAATGGG GGCGATCGCG TATTCGTGGA CGCTGGGCGA GCTGGCTGAG
GGTGTGCATC TGTCCAGGAA GCAACTTGCC CGCGTGTTCT CGAACGCGTA TGGGAAAACA
CCGCAAGCGT TCTTGACGAT GCTGCGGGTC GAGGAGATGG CCCGCCTGCT CCGCGAGACG
AACCTCACGA TCGAGCAAGC CGCGCAACGG GTGGGGTGGC GCTCCCGCAA CCGCGCCACG
ATCGCCTTCA CCCGCGCGAC CGGGATGACG CCGAGCGCCT ACCGGGCGCT GCGGGTCACC
GGGAACCAGC ATCCAGCTTG A
 
Protein sequence
MSQRALRGYQ VLLARTQTVH RPVGPLAYDC VKVIIVRDGS AILFSEFGQK PVRPGDVVVL 
GPNVLCGSEP EGHITVTTIY ADTDYVIDQA FWQYAAILHD RLDAPGFVRE AFTDPAQIIR
LGEERAGLLM PWLDELVALS VDGELERFHR TQALWFAIMD RIAPYLHVTD HRISPSQRAR
VVPVHPRVRR FAPTRSEAAE VREALMGAIA YSWTLGELAE GVHLSRKQLA RVFSNAYGKT
PQAFLTMLRV EEMARLLRET NLTIEQAAQR VGWRSRNRAT IAFTRATGMT PSAYRALRVT
GNQHPA